Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC120338.1-201ENST00000625074 1541 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AL589647.1-201ENST00000402485 466 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 DPPA2P3-201ENST00000411853 655 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AL591848.1-201ENST00000413092 322 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 Z74021.1-201ENST00000423610 407 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC007559.1-201ENST00000428736 355 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 HMGB3P9-201ENST00000441799 583 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 OR52J1P-201ENST00000450596 932 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 HSPE1P22-201ENST00000456856 327 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC021006.3-201ENST00000530771 192 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 EDDM3DP-201ENST00000554692 434 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 OR7E18P-201ENST00000592589 702 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC005520.3-201ENST00000602874 370 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC131238.1-201ENST00000617135 328 ntBASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.83□□□□□ -1.64
CDKL3Q8IVW4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC107021.2-201ENST00000567714 2095 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 OR56B2P-201ENST00000317102 954 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 MIR921-201ENST00000401133 56 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 MIR1178-201ENST00000408396 91 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 OR2B7P-201ENST00000429302 934 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 NPM1P48-201ENST00000436002 853 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 H2AFZP5-201ENST00000446960 382 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 OR1H1P-201ENST00000448731 937 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 SCARNA22-201ENST00000503991 125 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 AC092435.4-201ENST00000623012 4159 ntBASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDKL3Q8IVW4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 IRF5P1-201ENST00000504852 2164 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AL355852.1-201ENST00000454081 1771 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AC109780.1-201ENST00000451768 1344 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 RN7SKP115-201ENST00000363177 317 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 RN7SKP278-201ENST00000410504 342 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 COX6B1P1-201ENST00000415962 213 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 SUMO2P1-206ENST00000445436 284 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 MTND4LP12-201ENST00000448237 295 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AL356390.1-201ENST00000455684 397 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 RN7SL809P-201ENST00000482040 297 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 AC005000.1-201ENST00000536192 288 ntBASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.81□□□□□ -1.64
CDKL3Q8IVW4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms