Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SNORD65C-201ENST00000390962 71 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 EI24P3-201ENST00000399046 1062 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 RNU6-603P-201ENST00000411403 107 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 SLC35E1P1-201ENST00000419313 864 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 RPS26P47-201ENST00000427219 348 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 YWHAEP5-201ENST00000431545 765 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 NPM1P18-201ENST00000434232 732 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC002542.1-201ENST00000440683 193 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 OR51B8P-201ENST00000449892 769 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 RPL23AP71-201ENST00000470966 469 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 HMGB1P38-201ENST00000490557 577 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC024558.1-201ENST00000505008 528 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC069306.1-201ENST00000507006 843 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AP004607.2-201ENST00000533949 322 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC004825.1-201ENST00000555068 586 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 RN7SL356P-201ENST00000582228 248 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC115085.1-201ENST00000588924 229 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC025857.2-201ENST00000602711 238 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AL360012.1-201ENST00000602813 131 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC009237.13-201ENST00000603193 276 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AL512329.2-201ENST00000607350 548 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AP000240.1-201ENST00000609910 452 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC109583.2-201ENST00000617367 129 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC022960.3-201ENST00000619794 441 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC016717.3-201ENST00000624730 554 ntBASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LRRTM4Q86VH4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC092162.3-201ENST00000624511 1624 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 CR788268.1-201ENST00000603931 1809 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC006206.1-201ENST00000544842 3387 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC005294.1-201ENST00000355509 281 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 DBIP1-201ENST00000401435 260 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC246680.2-201ENST00000422106 389 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 OR5AW1P-201ENST00000426334 1006 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC138761.5-201ENST00000433967 325 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AL353597.2-202ENST00000434901 373 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 YWHAQP9-201ENST00000445891 512 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 TRY2P-201ENST00000448860 689 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 RN7SL177P-201ENST00000476596 299 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 RPS4XP1-201ENST00000482189 787 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 UBA52P7-201ENST00000486088 380 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 COX6B1P6-201ENST00000522347 255 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 CR392039.4-201ENST00000624968 501 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 ATE1-AS1-202ENST00000636460 506 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 LINC01808-202ENST00000641680 1116 ntBASIC5.3□□□□□ -1.56
LRRTM4Q86VH4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms