Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNU4-31P-201ENST00000384211 141 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL449283.1-202ENST00000418249 604 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 RPL34P3-201ENST00000421454 338 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 MTCO1P52-201ENST00000433928 531 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 NPM1P33-201ENST00000438918 872 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC245047.2-201ENST00000441060 530 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 RPL34P26-201ENST00000445636 354 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL672138.1-201ENST00000450604 1015 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC037198.2-201ENST00000478845 733 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 RN7SL170P-201ENST00000487098 295 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC021146.5-201ENST00000503544 545 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC109481.1-201ENST00000509173 282 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 SCARNA16.4-201ENST00000516956 187 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 CYCSP22-201ENST00000517555 339 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 NRBF2P4-201ENST00000520874 850 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 OR5AK3P-201ENST00000527486 1297 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC139103.1-201ENST00000534696 1030 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC027455.1-201ENST00000574104 594 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 RN7SL356P-201ENST00000582228 248 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC012616.1-201ENST00000600294 197 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL138895.2-201ENST00000603019 178 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC009779.8-202ENST00000607990 932 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL122125.1-201ENST00000616999 600 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AP005431.1-201ENST00000618479 319 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL121890.3-201ENST00000618494 516 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC073569.3-201ENST00000619055 682 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC021106.3-201ENST00000623925 531 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AP003400.3-201ENST00000624904 346 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC129915.3-201ENST00000634128 948 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC139713.2-210ENST00000641741 992 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 MIR193BHG-214ENST00000641765 509 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC100778.3-201ENST00000580060 1750 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC083843.3-201ENST00000623679 2186 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 RNA5SP27-201ENST00000363839 119 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 RN7SKP187-201ENST00000365536 330 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 RN7SKP16-201ENST00000410180 299 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 LIPT1P1-201ENST00000415870 1186 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 CACYBPP1-201ENST00000438592 684 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 SEPT14P24-201ENST00000447236 180 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms