Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 HSPA8P18-201ENST00000439846 1928 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 MTCO1P15-201ENST00000529569 1526 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 RNU6-468P-201ENST00000384003 109 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 RNU1-106P-201ENST00000384382 164 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 GSTA12P-201ENST00000402398 508 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 HMGB3P19-201ENST00000403971 560 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 MIR1182-201ENST00000408363 97 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 SNORA79B-201ENST00000410557 148 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AL158825.1-201ENST00000414735 521 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 PTP4A1P7-201ENST00000423476 514 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 RPL19P16-201ENST00000433839 588 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC044797.1-201ENST00000445744 679 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 RPL7AP6-201ENST00000477943 801 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 BX284632.1-201ENST00000478218 541 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC004453.1-201ENST00000487895 408 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 RPL32P9-201ENST00000487963 407 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC006427.1-201ENST00000514359 712 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC091163.3-201ENST00000518269 1144 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AP001207.2-201ENST00000519490 539 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AL512310.9-201ENST00000553311 948 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AL132857.1-201ENST00000555180 708 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC127024.5-201ENST00000580085 462 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC084373.1-201ENST00000603311 235 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC099785.1-201ENST00000605697 437 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AL355493.4-201ENST00000618530 292 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC120349.3-201ENST00000624377 529 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 MTND2P41-201ENST00000637599 773 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 CASC19-222ENST00000641321 1173 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AL356317.1-201ENST00000396110 1436 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AC007342.5-201ENST00000571340 2142 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VSTM1Q6UX27 TRIM51GP-201ENST00000534741 1350 ntBASIC5.54□□□□□ -1.52
VSTM1Q6UX27 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 CR382285.2-201ENST00000624662 1495 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RAD1P1-201ENST00000231383 813 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RNU6-252P-201ENST00000363232 107 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 SNORA58B-201ENST00000364259 136 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 RNA5SP90-201ENST00000364801 99 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 SNORA48.4-201ENST00000391089 134 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AL121878.1-201ENST00000418638 859 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 CLUHP1-201ENST00000435012 1190 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 Z77249.1-201ENST00000444622 1175 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AL161722.1-201ENST00000446972 1032 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 EIF2S2P2-201ENST00000447161 982 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 COX6B1P2-201ENST00000489624 230 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AL049874.2-201ENST00000492636 288 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC010627.1-201ENST00000503819 1294 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 ASNSP4-201ENST00000511103 447 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC023538.1-201ENST00000534576 736 ntBASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.53□□□□□ -1.52
VSTM1Q6UX27 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms