Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP41Q3LFD5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP41Q3LFD5 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP41Q3LFD5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
USP41Q3LFD5 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.4□□□□□ -1.55
USP41Q3LFD5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.4□□□□□ -1.55
USP41Q3LFD5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP41Q3LFD5 MAPK10-263ENST00000641052 4307 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 MIR192-201ENST00000384915 110 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 RNU6-1176P-201ENST00000390955 107 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AL590139.1-201ENST00000416267 400 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC245028.1-201ENST00000423259 256 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 MORF4L1P7-201ENST00000426038 703 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC009238.2-201ENST00000431026 355 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 RPL19P16-201ENST00000433839 588 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 RPL7P11-201ENST00000437586 658 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 IGHV5-78-201ENST00000450948 295 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 OR52E3P-201ENST00000452083 936 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC021660.1-201ENST00000465006 554 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC063943.1-201ENST00000465434 453 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC078857.1-201ENST00000469870 667 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC006463.2-201ENST00000473326 348 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 RN7SL205P-201ENST00000490174 284 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 OR7H2P-201ENST00000513483 306 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC113192.3-201ENST00000529152 742 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 BNIP3P1-201ENST00000547295 580 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 DUX4L52-201ENST00000549363 777 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 RN7SL52P-201ENST00000584271 284 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 MTCO3P22-201ENST00000603219 784 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC120053.1-201ENST00000607706 736 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AL161616.1-201ENST00000611867 286 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 RN7SL722P-201ENST00000617780 284 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 RN7SL565P-201ENST00000618246 284 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 AL163051.2-201ENST00000618976 735 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 MIR6839-201ENST00000620425 113 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.39□□□□□ -1.55
USP41Q3LFD5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
USP41Q3LFD5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP41Q3LFD5 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP41Q3LFD5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP41Q3LFD5 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP41Q3LFD5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP41Q3LFD5 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 SNORA2.3-201ENST00000383920 135 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 SNORA48.4-201ENST00000391089 134 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 RNA5SP105-201ENST00000391123 113 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 AL445213.1-201ENST00000412589 747 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 AL807761.1-201ENST00000417622 171 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 HSPE1P16-201ENST00000426640 348 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 BX323845.1-201ENST00000432417 179 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 RPS29P33-201ENST00000456717 146 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 RN7SL738P-201ENST00000470264 297 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 IGLV2-34-201ENST00000490007 283 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 AC093890.1-201ENST00000502554 540 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 AC021146.7-201ENST00000509604 775 ntBASIC5.38□□□□□ -1.55
USP41Q3LFD5 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.38□□□□□ -1.55
USP41Q3LFD5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms