Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL592293.2-201ENST00000422292 996 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 C4BPAP2-201ENST00000428434 478 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 RPL12P28-201ENST00000430852 489 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.49□□□□□ -1.53
GABPAQ06546 ELOCP3-201ENST00000439303 348 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.49□□□□□ -1.53
GABPAQ06546 EIF2S2P2-201ENST00000447161 982 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.49□□□□□ -1.53
GABPAQ06546 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
GABPAQ06546 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.49□□□□□ -1.53
GABPAQ06546 NDUFA5P9-201ENST00000472609 340 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 OR8G5-201ENST00000524943 1041 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.49□□□□□ -1.53
GABPAQ06546 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.49□□□□□ -1.53
GABPAQ06546 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.49□□□□□ -1.53
GABPAQ06546 VN1R81P-201ENST00000602085 372 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 AL133338.2-201ENST00000604292 736 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 AL356218.2-201ENST00000605264 187 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 OR7A19P-201ENST00000608051 733 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 MIR6758-201ENST00000620653 63 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.49□□□□□ -1.53
GABPAQ06546 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
GABPAQ06546 MTCO1P22-201ENST00000604619 1360 ntBASIC5.49□□□□□ -1.53
GABPAQ06546 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GABPAQ06546 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.49□□□□□ -1.53
GABPAQ06546 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GABPAQ06546 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.49□□□□□ -1.53
GABPAQ06546 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.49□□□□□ -1.53
GABPAQ06546 AL929601.4-201ENST00000613011 1341 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.48□□□□□ -1.53
GABPAQ06546 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
GABPAQ06546 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 RNA5SP447-201ENST00000363749 119 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 SNORA62-201ENST00000365493 153 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 FABP12P1-201ENST00000401911 322 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AP000580.1-201ENST00000404439 358 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 CASKP1-201ENST00000412870 582 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 MTND4LP21-201ENST00000415303 295 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.48□□□□□ -1.53
GABPAQ06546 CHIAP3-201ENST00000423668 1133 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 CKS1BP6-201ENST00000424932 240 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.48□□□□□ -1.53
GABPAQ06546 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.48□□□□□ -1.53
GABPAQ06546 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.48□□□□□ -1.53
GABPAQ06546 AC091390.1-201ENST00000433904 331 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AL157385.1-201ENST00000446973 268 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.48□□□□□ -1.53
GABPAQ06546 NIP7P2-201ENST00000485801 544 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AC013356.1-201ENST00000489027 564 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.48□□□□□ -1.53
GABPAQ06546 AC009643.1-201ENST00000532030 391 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.48□□□□□ -1.53
GABPAQ06546 AC069061.3-201ENST00000582254 823 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.48□□□□□ -1.53
GABPAQ06546 AC005191.1-201ENST00000603950 358 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.48□□□□□ -1.53
GABPAQ06546 AL121873.1-201ENST00000616013 524 ntBASIC5.48□□□□□ -1.53
GABPAQ06546 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.48□□□□□ -1.53
GABPAQ06546 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GABPAQ06546 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
GABPAQ06546 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.48□□□□□ -1.53
GABPAQ06546 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
GABPAQ06546 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 DHX9P1-201ENST00000436565 3076 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.47□□□□□ -1.53
GABPAQ06546 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 P2RY10P2-201ENST00000416730 913 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.47□□□□□ -1.53
GABPAQ06546 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.47□□□□□ -1.53
GABPAQ06546 TXNP2-201ENST00000443918 295 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.47□□□□□ -1.53
GABPAQ06546 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.47□□□□□ -1.53
GABPAQ06546 RHEBP2-201ENST00000450289 600 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 OR52Y1P-201ENST00000452418 828 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC092905.1-201ENST00000467527 949 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC026979.1-201ENST00000492525 396 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 HMGB3P14-201ENST00000494195 599 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 MORF4L2P1-201ENST00000503761 858 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC138409.2-202ENST00000507274 458 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.47□□□□□ -1.53
GABPAQ06546 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.47□□□□□ -1.53
GABPAQ06546 CCNHP1-201ENST00000513311 678 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.47□□□□□ -1.53
GABPAQ06546 AP000827.1-201ENST00000527814 258 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC087477.6-201ENST00000559595 843 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 MIR4277-201ENST00000578298 84 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.47□□□□□ -1.53
GABPAQ06546 MIR4697-201ENST00000582977 78 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC010503.3-201ENST00000594355 540 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC107905.1-201ENST00000616204 426 ntBASIC5.47□□□□□ -1.53
GABPAQ06546 AC011815.3-201ENST00000624194 473 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms