Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VBP1P61758 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VBP1P61758 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VBP1P61758 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 AL355852.1-201ENST00000454081 1771 ntBASIC4.23□□□□□ -1.73
VBP1P61758 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 OR52B3P-201ENST00000314715 928 ntBASIC4.23□□□□□ -1.73
VBP1P61758 RN7SKP124-201ENST00000364730 341 ntBASIC4.23□□□□□ -1.73
VBP1P61758 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VBP1P61758 MIR551B-201ENST00000384984 96 ntBASIC4.23□□□□□ -1.73
VBP1P61758 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.23□□□□□ -1.73
VBP1P61758 AL359885.1-201ENST00000415786 903 ntBASIC4.23□□□□□ -1.73
VBP1P61758 BMS1P17-202ENST00000416720 316 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.23□□□□□ -1.73
VBP1P61758 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 AL138785.1-201ENST00000425821 331 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.23□□□□□ -1.73
VBP1P61758 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 RPL12P28-201ENST00000430852 489 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AL354893.1-201ENST00000433735 348 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AL390119.1-201ENST00000440329 312 ntBASIC4.23□□□□□ -1.73
VBP1P61758 RPS27AP15-201ENST00000447672 466 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.23□□□□□ -1.73
VBP1P61758 AC011476.1-201ENST00000466725 307 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AC105918.1-201ENST00000474399 838 ntBASIC4.23□□□□□ -1.73
VBP1P61758 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.23□□□□□ -1.73
VBP1P61758 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.23□□□□□ -1.73
VBP1P61758 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.23□□□□□ -1.73
VBP1P61758 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 AC093249.4-201ENST00000564755 259 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.23□□□□□ -1.73
VBP1P61758 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 AC008759.1-201ENST00000589783 983 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 AL591926.8-201ENST00000616876 211 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AL022401.1-201ENST00000619498 108 ntBASIC4.23□□□□□ -1.73
VBP1P61758 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.23□□□□□ -1.73
VBP1P61758 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VBP1P61758 AC009452.1-201ENST00000640823 606 ntBASIC4.23□□□□□ -1.73
VBP1P61758 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VBP1P61758 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VBP1P61758 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VBP1P61758 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
VBP1P61758 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VBP1P61758 AL136964.1-201ENST00000622038 2990 ntBASIC4.23□□□□□ -1.73
VBP1P61758 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VBP1P61758 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VBP1P61758 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.22□□□□□ -1.73
VBP1P61758 AC067945.1-201ENST00000342609 618 ntBASIC4.22□□□□□ -1.73
VBP1P61758 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VBP1P61758 SNORA70-201ENST00000384436 135 ntBASIC4.22□□□□□ -1.73
VBP1P61758 MIR191-201ENST00000384873 92 ntBASIC4.22□□□□□ -1.73
VBP1P61758 RNU1-77P-201ENST00000390868 162 ntBASIC4.22□□□□□ -1.73
VBP1P61758 AC004386.1-201ENST00000393214 761 ntBASIC4.22□□□□□ -1.73
VBP1P61758 VN1R8P-201ENST00000407739 893 ntBASIC4.22□□□□□ -1.73
VBP1P61758 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
VBP1P61758 TBCAP2-201ENST00000416175 326 ntBASIC4.22□□□□□ -1.73
VBP1P61758 VN1R31P-201ENST00000417498 730 ntBASIC4.22□□□□□ -1.73
VBP1P61758 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 RPL34P3-201ENST00000421454 338 ntBASIC4.22□□□□□ -1.73
VBP1P61758 SKP1P3-201ENST00000429280 487 ntBASIC4.22□□□□□ -1.73
VBP1P61758 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 BTG3P1-201ENST00000435859 716 ntBASIC4.22□□□□□ -1.73
VBP1P61758 PSMD10P3-201ENST00000437000 448 ntBASIC4.22□□□□□ -1.73
VBP1P61758 AL445665.1-202ENST00000452436 324 ntBASIC4.22□□□□□ -1.73
VBP1P61758 HLA-DPA3-207ENST00000454398 229 ntBASIC4.22□□□□□ -1.73
VBP1P61758 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.22□□□□□ -1.73
VBP1P61758 AL133445.1-201ENST00000467051 452 ntBASIC4.22□□□□□ -1.73
VBP1P61758 RPS21P4-201ENST00000487122 248 ntBASIC4.22□□□□□ -1.73
VBP1P61758 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 AC090151.1-201ENST00000520784 730 ntBASIC4.22□□□□□ -1.73
VBP1P61758 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VBP1P61758 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.22□□□□□ -1.73
VBP1P61758 FO681491.1-202ENST00000623392 737 ntBASIC4.22□□□□□ -1.73
VBP1P61758 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.22□□□□□ -1.73
VBP1P61758 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.22□□□□□ -1.73
VBP1P61758 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
VBP1P61758 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VBP1P61758 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VBP1P61758 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.22□□□□□ -1.73
VBP1P61758 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VBP1P61758 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.22□□□□□ -1.73
VBP1P61758 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VBP1P61758 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.21□□□□□ -1.73
VBP1P61758 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VBP1P61758 AL031985.3-201ENST00000565390 2449 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms