Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.64□□□□□ -1.51
COPB1P53618 RPL7P45-201ENST00000455851 743 ntBASIC5.64□□□□□ -1.51
COPB1P53618 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.64□□□□□ -1.51
COPB1P53618 RPL7P6-201ENST00000480903 738 ntBASIC5.64□□□□□ -1.51
COPB1P53618 LARP7P4-201ENST00000481075 878 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.64□□□□□ -1.51
COPB1P53618 AC069304.1-201ENST00000491593 704 ntBASIC5.64□□□□□ -1.51
COPB1P53618 RN7SL447P-201ENST00000494711 245 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AC008427.1-201ENST00000503102 655 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.64□□□□□ -1.51
COPB1P53618 BOLA3P3-201ENST00000505182 232 ntBASIC5.64□□□□□ -1.51
COPB1P53618 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.64□□□□□ -1.51
COPB1P53618 AC012400.1-201ENST00000518452 381 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AP001207.2-201ENST00000519490 539 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.64□□□□□ -1.51
COPB1P53618 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.64□□□□□ -1.51
COPB1P53618 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.64□□□□□ -1.51
COPB1P53618 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.64□□□□□ -1.51
COPB1P53618 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
COPB1P53618 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.64□□□□□ -1.51
COPB1P53618 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.64□□□□□ -1.51
COPB1P53618 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.64□□□□□ -1.51
COPB1P53618 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.64□□□□□ -1.51
COPB1P53618 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.64□□□□□ -1.51
COPB1P53618 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.64□□□□□ -1.51
COPB1P53618 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPB1P53618 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPB1P53618 MIR3176-201ENST00000582210 90 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.64□□□□□ -1.51
COPB1P53618 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.64□□□□□ -1.51
COPB1P53618 SUGT1P3-202ENST00000604259 383 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.64□□□□□ -1.51
COPB1P53618 CU459211.1-201ENST00000635667 749 ntBASIC5.64□□□□□ -1.51
COPB1P53618 CYP4F35P-202ENST00000636121 390 ntBASIC5.64□□□□□ -1.51
COPB1P53618 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
COPB1P53618 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COPB1P53618 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COPB1P53618 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COPB1P53618 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COPB1P53618 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COPB1P53618 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COPB1P53618 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPB1P53618 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.64□□□□□ -1.51
COPB1P53618 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COPB1P53618 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPB1P53618 AC025574.1-201ENST00000554784 1653 ntBASIC5.63□□□□□ -1.51
COPB1P53618 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPB1P53618 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPB1P53618 AC000374.1-201ENST00000434698 1745 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.63□□□□□ -1.51
COPB1P53618 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COPB1P53618 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.63□□□□□ -1.51
COPB1P53618 AC013442.1-201ENST00000397347 228 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.63□□□□□ -1.51
COPB1P53618 AL390774.1-201ENST00000411924 246 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.63□□□□□ -1.51
COPB1P53618 AL158825.1-201ENST00000414735 521 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.63□□□□□ -1.51
COPB1P53618 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.63□□□□□ -1.51
COPB1P53618 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.63□□□□□ -1.51
COPB1P53618 RPS11P7-201ENST00000442125 465 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.63□□□□□ -1.51
COPB1P53618 EIF2S2P2-201ENST00000447161 982 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.63□□□□□ -1.51
COPB1P53618 METTL15P1-201ENST00000481421 1045 ntBASIC5.63□□□□□ -1.51
COPB1P53618 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.63□□□□□ -1.51
COPB1P53618 MORF4L1P3-201ENST00000525966 950 ntBASIC5.63□□□□□ -1.51
COPB1P53618 DUXAP5-201ENST00000529668 529 ntBASIC5.63□□□□□ -1.51
COPB1P53618 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.63□□□□□ -1.51
COPB1P53618 AC126177.5-201ENST00000549599 178 ntBASIC5.63□□□□□ -1.51
COPB1P53618 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 AL512310.9-201ENST00000553311 948 ntBASIC5.63□□□□□ -1.51
COPB1P53618 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 AC016180.1-201ENST00000567945 403 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.63□□□□□ -1.51
COPB1P53618 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.63□□□□□ -1.51
COPB1P53618 AL589674.2-201ENST00000604304 337 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AC104695.2-201ENST00000605056 775 ntBASIC5.63□□□□□ -1.51
COPB1P53618 OR7A19P-201ENST00000608051 733 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 RMST_5.1-201ENST00000618704 126 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AP000676.4-201ENST00000624659 623 ntBASIC5.63□□□□□ -1.51
COPB1P53618 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.63□□□□□ -1.51
COPB1P53618 MTND2P41-201ENST00000637599 773 ntBASIC5.63□□□□□ -1.51
COPB1P53618 AC073869.7-201ENST00000640874 297 ntBASIC5.63□□□□□ -1.51
COPB1P53618 OR5AC4P-202ENST00000642086 985 ntBASIC5.63□□□□□ -1.51
COPB1P53618 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
COPB1P53618 PROS2P-201ENST00000474651 1951 ntBASIC5.63□□□□□ -1.51
COPB1P53618 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPB1P53618 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPB1P53618 CASC19-221ENST00000641309 1382 ntBASIC5.63□□□□□ -1.51
COPB1P53618 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.63□□□□□ -1.51
COPB1P53618 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
COPB1P53618 AC011447.7-201ENST00000624228 1590 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms