Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL163051.2-201ENST00000618976 735 ntBASIC4.92□□□□□ -1.62
PDX1P52945 MIR6839-201ENST00000620425 113 ntBASIC4.92□□□□□ -1.62
PDX1P52945 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.92□□□□□ -1.62
PDX1P52945 AC010435.1-201ENST00000623353 1177 ntBASIC4.92□□□□□ -1.62
PDX1P52945 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.92□□□□□ -1.62
PDX1P52945 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.92□□□□□ -1.62
PDX1P52945 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.92□□□□□ -1.62
PDX1P52945 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDX1P52945 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.92□□□□□ -1.62
PDX1P52945 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDX1P52945 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PDX1P52945 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 AC002525.1-201ENST00000624392 1622 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.91□□□□□ -1.62
PDX1P52945 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.91□□□□□ -1.62
PDX1P52945 RN7SKP153-201ENST00000365026 316 ntBASIC4.91□□□□□ -1.62
PDX1P52945 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 OR8V1P-201ENST00000395193 873 ntBASIC4.91□□□□□ -1.62
PDX1P52945 RPL12P9-201ENST00000412942 488 ntBASIC4.91□□□□□ -1.62
PDX1P52945 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 PTP4A1P1-201ENST00000420539 515 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.91□□□□□ -1.62
PDX1P52945 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.91□□□□□ -1.62
PDX1P52945 RPL7P11-201ENST00000437586 658 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 AC063943.1-201ENST00000465434 453 ntBASIC4.91□□□□□ -1.62
PDX1P52945 RN7SL814P-201ENST00000487715 300 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 AC016559.2-201ENST00000510759 359 ntBASIC4.91□□□□□ -1.62
PDX1P52945 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 AC092451.2-201ENST00000538746 658 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.91□□□□□ -1.62
PDX1P52945 AC005242.1-201ENST00000585658 438 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC011626.1-201ENST00000604710 562 ntBASIC4.91□□□□□ -1.62
PDX1P52945 BNIP3P19-201ENST00000605397 577 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC084824.5-201ENST00000612009 413 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC006249.1-201ENST00000621223 471 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC091932.2-201ENST00000623014 291 ntBASIC4.91□□□□□ -1.62
PDX1P52945 MIR7641-1-201ENST00000627518 61 ntBASIC4.91□□□□□ -1.62
PDX1P52945 FRG1EP-201ENST00000634469 770 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.91□□□□□ -1.62
PDX1P52945 AC106858.1-201ENST00000637497 429 ntBASIC4.91□□□□□ -1.62
PDX1P52945 AC006484.1-201ENST00000435086 1884 ntBASIC4.91□□□□□ -1.62
PDX1P52945 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 AL450345.1-202ENST00000605741 3881 ntBASIC4.91□□□□□ -1.62
PDX1P52945 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDX1P52945 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.91□□□□□ -1.62
PDX1P52945 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.9□□□□□ -1.62
PDX1P52945 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDX1P52945 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDX1P52945 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.9□□□□□ -1.62
PDX1P52945 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDX1P52945 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.9□□□□□ -1.62
PDX1P52945 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PDX1P52945 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.9□□□□□ -1.62
PDX1P52945 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PDX1P52945 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDX1P52945 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.9□□□□□ -1.62
PDX1P52945 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.9□□□□□ -1.62
PDX1P52945 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDX1P52945 RNA5SP505-201ENST00000364748 108 ntBASIC4.9□□□□□ -1.63
PDX1P52945 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDX1P52945 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDX1P52945 RNU6-31P-201ENST00000384388 108 ntBASIC4.9□□□□□ -1.63
PDX1P52945 RNA5SP187-201ENST00000384400 119 ntBASIC4.9□□□□□ -1.63
PDX1P52945 RNU6-1263P-201ENST00000384601 106 ntBASIC4.9□□□□□ -1.63
PDX1P52945 MIR589-201ENST00000385238 99 ntBASIC4.9□□□□□ -1.63
PDX1P52945 RNA5SP105-201ENST00000391123 113 ntBASIC4.9□□□□□ -1.63
PDX1P52945 HMGN2P27-201ENST00000427352 270 ntBASIC4.9□□□□□ -1.63
PDX1P52945 PRPF38AP2-201ENST00000438179 851 ntBASIC4.9□□□□□ -1.63
PDX1P52945 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.9□□□□□ -1.63
PDX1P52945 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.9□□□□□ -1.63
PDX1P52945 AC112498.1-201ENST00000444401 332 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms