Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CASQ1P31415 USP9YP4-201ENST00000424401 1745 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.12□□□□□ -1.59
CASQ1P31415 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.12□□□□□ -1.59
CASQ1P31415 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CASQ1P31415 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CASQ1P31415 RN7SKP124-201ENST00000364730 341 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 LYPLA1P3-201ENST00000402650 695 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CASQ1P31415 SDHDP6-201ENST00000414693 480 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.12□□□□□ -1.59
CASQ1P31415 RPS6P12-201ENST00000432491 726 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.12□□□□□ -1.59
CASQ1P31415 AC104306.1-201ENST00000449702 371 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 OR52E7P-201ENST00000452394 933 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CASQ1P31415 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.12□□□□□ -1.59
CASQ1P31415 AC108022.1-201ENST00000493466 478 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.12□□□□□ -1.59
CASQ1P31415 RNA5SP154-201ENST00000516193 111 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.12□□□□□ -1.59
CASQ1P31415 AC068714.1-201ENST00000559623 800 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.12□□□□□ -1.59
CASQ1P31415 AC015912.2-201ENST00000571053 181 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 AC027455.1-201ENST00000574104 594 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.12□□□□□ -1.59
CASQ1P31415 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.12□□□□□ -1.59
CASQ1P31415 AC105254.2-201ENST00000603636 436 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 AC005377.1-201ENST00000605126 456 ntBASIC5.12□□□□□ -1.59
CASQ1P31415 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.12□□□□□ -1.59
CASQ1P31415 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.12□□□□□ -1.59
CASQ1P31415 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.12□□□□□ -1.59
CASQ1P31415 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CASQ1P31415 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CASQ1P31415 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.12□□□□□ -1.59
CASQ1P31415 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.11□□□□□ -1.59
CASQ1P31415 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.11□□□□□ -1.59
CASQ1P31415 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CASQ1P31415 AC023490.2-201ENST00000359859 470 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 RNA5SP502-201ENST00000362694 119 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.11□□□□□ -1.59
CASQ1P31415 TBCAP2-201ENST00000416175 326 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.11□□□□□ -1.59
CASQ1P31415 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.11□□□□□ -1.59
CASQ1P31415 AC004552.1-201ENST00000419089 348 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 RPL36AP39-201ENST00000445859 318 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AC009127.1-201ENST00000467090 155 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 RPS26P3-201ENST00000470205 348 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 S100A11P1-201ENST00000477525 312 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 MTND6P6-201ENST00000478031 263 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 AC012158.1-204ENST00000483430 465 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AC090543.2-201ENST00000483963 348 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AC004057.1-201ENST00000485827 348 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 SMARCE1P4-201ENST00000523647 241 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 NPM1P35-201ENST00000533043 868 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.11□□□□□ -1.59
CASQ1P31415 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.11□□□□□ -1.59
CASQ1P31415 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.11□□□□□ -1.59
CASQ1P31415 TVP23CP2-201ENST00000571473 623 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 MTND6P33-201ENST00000571794 183 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.11□□□□□ -1.59
CASQ1P31415 AL359091.2-201ENST00000609303 556 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AL022401.1-201ENST00000619498 108 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 MIR7154-201ENST00000620673 73 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AC000123.2-201ENST00000623124 461 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 OR11H5P-202ENST00000641612 1325 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 AL133412.1-201ENST00000380194 2992 ntBASIC5.11□□□□□ -1.59
CASQ1P31415 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CASQ1P31415 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CASQ1P31415 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CASQ1P31415 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CASQ1P31415 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CASQ1P31415 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.1□□□□□ -1.59
CASQ1P31415 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CASQ1P31415 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CASQ1P31415 RNA5SP52-201ENST00000362448 134 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 MIR93-201ENST00000385024 80 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 RNA5SP345-201ENST00000410646 108 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 RNA5SP104-201ENST00000410989 118 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CASQ1P31415 RPL7P57-201ENST00000423238 740 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CASQ1P31415 AC064862.4-201ENST00000442180 334 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 OR7E125P-201ENST00000443450 846 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.1□□□□□ -1.59
CASQ1P31415 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.1□□□□□ -1.59
CASQ1P31415 RPS26P41-201ENST00000450370 284 ntBASIC5.1□□□□□ -1.59
CASQ1P31415 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms