Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 AL592182.3-201ENST00000642132 3304 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.36□□□□□ -1.55
COL4A5P29400 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.36□□□□□ -1.55
COL4A5P29400 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 AC097374.1-203ENST00000400783 485 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
COL4A5P29400 AL162151.2-201ENST00000448875 158 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 AC146944.2-203ENST00000502493 354 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 AK4P6-201ENST00000505168 528 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A5P29400 NPM1P41-201ENST00000512920 831 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 AC139495.1-202ENST00000513164 354 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 CCNG2P1-201ENST00000549521 1000 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A5P29400 AC087477.6-201ENST00000559595 843 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A5P29400 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.36□□□□□ -1.55
COL4A5P29400 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
COL4A5P29400 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COL4A5P29400 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.36□□□□□ -1.55
COL4A5P29400 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
COL4A5P29400 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A5P29400 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 ADAM5-202ENST00000399789 1942 ntBASIC5.35□□□□□ -1.55
COL4A5P29400 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL4A5P29400 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 SNORD46.1-201ENST00000364139 104 ntBASIC5.35□□□□□ -1.55
COL4A5P29400 AC021660.1-201ENST00000465006 554 ntBASIC5.35□□□□□ -1.55
COL4A5P29400 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
COL4A5P29400 PARP4P3-201ENST00000510265 317 ntBASIC5.35□□□□□ -1.55
COL4A5P29400 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A5P29400 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A5P29400 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A5P29400 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A5P29400 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A5P29400 AC021422.1-201ENST00000621212 473 ntBASIC5.35□□□□□ -1.55
COL4A5P29400 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A5P29400 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
COL4A5P29400 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A5P29400 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A5P29400 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 AC022417.1-201ENST00000624768 1303 ntBASIC5.35□□□□□ -1.55
COL4A5P29400 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A5P29400 AC104260.2-201ENST00000623551 3497 ntBASIC5.35□□□□□ -1.55
COL4A5P29400 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A5P29400 SNORA62.3-201ENST00000365110 153 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
COL4A5P29400 AC093578.1-201ENST00000415219 368 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 RPL21P43-201ENST00000425440 472 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 AL136231.1-201ENST00000429407 730 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 RPL37P1-201ENST00000432310 284 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 RPL35AP21-201ENST00000437667 333 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 RPS27AP17-201ENST00000463344 455 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.34□□□□□ -1.55
COL4A5P29400 PGBD4P4-201ENST00000509673 613 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 RNA5SP519-201ENST00000516480 119 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.34□□□□□ -1.55
COL4A5P29400 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A5P29400 MIR4298-201ENST00000584380 73 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 BNIP3P11-201ENST00000603878 563 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
COL4A5P29400 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.34□□□□□ -1.55
COL4A5P29400 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
COL4A5P29400 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A5P29400 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.34□□□□□ -1.55
COL4A5P29400 TTC41P-205ENST00000551270 3963 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A5P29400 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
COL4A5P29400 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A5P29400 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A5P29400 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A5P29400 AP001029.2-203ENST00000589795 4910 ntBASIC5.34□□□□□ -1.55
COL4A5P29400 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.34□□□□□ -1.55
COL4A5P29400 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms