Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 FABP5P6-201ENST00000510588 409 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 AC006427.1-201ENST00000514359 712 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.01□□□□□ -1.61
CDH3P22223 OR4A46P-201ENST00000527255 933 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 RN7SL708P-201ENST00000580952 299 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH3P22223 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH3P22223 AC011447.4-201ENST00000587562 111 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AC090510.2-201ENST00000617465 629 ntBASIC5.01□□□□□ -1.61
CDH3P22223 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH3P22223 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH3P22223 LINC01739-205ENST00000641890 573 ntBASIC5.01□□□□□ -1.61
CDH3P22223 AC090971.4-201ENST00000560291 1800 ntBASIC5.01□□□□□ -1.61
CDH3P22223 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH3P22223 PANDAR-201ENST00000629595 1506 ntBASIC5.01□□□□□ -1.61
CDH3P22223 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH3P22223 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH3P22223 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH3P22223 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
CDH3P22223 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 SNORA58B-201ENST00000364259 136 ntBASIC5□□□□□ -1.61
CDH3P22223 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5□□□□□ -1.61
CDH3P22223 OR6K3-202ENST00000368146 996 ntBASIC5□□□□□ -1.61
CDH3P22223 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5□□□□□ -1.61
CDH3P22223 NUDT19P3-201ENST00000404698 555 ntBASIC5□□□□□ -1.61
CDH3P22223 AL136131.1-201ENST00000406079 803 ntBASIC5□□□□□ -1.61
CDH3P22223 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5□□□□□ -1.61
CDH3P22223 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5□□□□□ -1.61
CDH3P22223 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5□□□□□ -1.61
CDH3P22223 EI24P4-201ENST00000423683 1078 ntBASIC5□□□□□ -1.61
CDH3P22223 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5□□□□□ -1.61
CDH3P22223 RPS27P18-201ENST00000431701 247 ntBASIC5□□□□□ -1.61
CDH3P22223 HMGB3P9-201ENST00000441799 583 ntBASIC5□□□□□ -1.61
CDH3P22223 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 AC092647.2-201ENST00000452998 253 ntBASIC5□□□□□ -1.61
CDH3P22223 DNAJB5P1-201ENST00000454004 806 ntBASIC5□□□□□ -1.61
CDH3P22223 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5□□□□□ -1.61
CDH3P22223 AC022795.1-201ENST00000473808 480 ntBASIC5□□□□□ -1.61
CDH3P22223 AC090114.3-201ENST00000479267 829 ntBASIC5□□□□□ -1.61
CDH3P22223 AC093270.2-201ENST00000486157 792 ntBASIC5□□□□□ -1.61
CDH3P22223 RPS12P31-201ENST00000491419 398 ntBASIC5□□□□□ -1.61
CDH3P22223 AC090543.1-201ENST00000492168 485 ntBASIC5□□□□□ -1.61
CDH3P22223 NDUFA5P12-201ENST00000503796 343 ntBASIC5□□□□□ -1.61
CDH3P22223 AF186190.1-201ENST00000517470 480 ntBASIC5□□□□□ -1.61
CDH3P22223 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5□□□□□ -1.61
CDH3P22223 MTND1P36-201ENST00000522384 936 ntBASIC5□□□□□ -1.61
CDH3P22223 AC013701.1-201ENST00000522657 465 ntBASIC5□□□□□ -1.61
CDH3P22223 AC100784.1-201ENST00000522790 310 ntBASIC5□□□□□ -1.61
CDH3P22223 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5□□□□□ -1.61
CDH3P22223 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5□□□□□ -1.61
CDH3P22223 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5□□□□□ -1.61
CDH3P22223 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5□□□□□ -1.61
CDH3P22223 AL133247.2-201ENST00000603236 482 ntBASIC5□□□□□ -1.61
CDH3P22223 AC008814.1-201ENST00000603797 406 ntBASIC5□□□□□ -1.61
CDH3P22223 AC005014.3-201ENST00000605985 190 ntBASIC5□□□□□ -1.61
CDH3P22223 AL512506.1-201ENST00000613918 449 ntBASIC5□□□□□ -1.61
CDH3P22223 RMST_5.1-201ENST00000618704 126 ntBASIC5□□□□□ -1.61
CDH3P22223 AC015722.2-201ENST00000622210 551 ntBASIC5□□□□□ -1.61
CDH3P22223 AC079298.2-201ENST00000623885 459 ntBASIC5□□□□□ -1.61
CDH3P22223 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5□□□□□ -1.61
CDH3P22223 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5□□□□□ -1.61
CDH3P22223 AC073869.10-201ENST00000642016 354 ntBASIC5□□□□□ -1.61
CDH3P22223 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 AC023421.1-201ENST00000590535 1785 ntBASIC5□□□□□ -1.61
CDH3P22223 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CDH3P22223 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CDH3P22223 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CDH3P22223 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH3P22223 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH3P22223 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH3P22223 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH3P22223 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5□□□□□ -1.61
CDH3P22223 CASC19-281ENST00000642118 1554 ntBASIC4.99□□□□□ -1.61
CDH3P22223 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH3P22223 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH3P22223 AL022322.2-201ENST00000624072 20397 ntBASIC4.99□□□□□ -1.61
CDH3P22223 MIR589-201ENST00000385238 99 ntBASIC4.99□□□□□ -1.61
CDH3P22223 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH3P22223 AL645733.1-201ENST00000402250 217 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AL589647.1-201ENST00000402485 466 ntBASIC4.99□□□□□ -1.61
CDH3P22223 MIR1182-201ENST00000408363 97 ntBASIC4.99□□□□□ -1.61
CDH3P22223 RN7SKP199-201ENST00000410325 305 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AC073464.3-201ENST00000422564 712 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms