Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC093267.1-201ENST00000489176 961 ntBASIC3.79□□□□□ -1.8
CD28P10747 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.79□□□□□ -1.8
CD28P10747 AC113398.2-201ENST00000507630 558 ntBASIC3.79□□□□□ -1.8
CD28P10747 AC111000.3-201ENST00000508057 576 ntBASIC3.79□□□□□ -1.8
CD28P10747 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD28P10747 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.79□□□□□ -1.8
CD28P10747 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.79□□□□□ -1.8
CD28P10747 AC100784.1-201ENST00000522790 310 ntBASIC3.79□□□□□ -1.8
CD28P10747 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.79□□□□□ -1.8
CD28P10747 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.79□□□□□ -1.8
CD28P10747 AC027369.5-201ENST00000533838 755 ntBASIC3.79□□□□□ -1.8
CD28P10747 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
CD28P10747 AC133555.2-201ENST00000550213 292 ntBASIC3.79□□□□□ -1.8
CD28P10747 AL512310.9-201ENST00000553311 948 ntBASIC3.79□□□□□ -1.8
CD28P10747 AC040958.1-201ENST00000561102 201 ntBASIC3.79□□□□□ -1.8
CD28P10747 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.79□□□□□ -1.8
CD28P10747 AP005901.4-201ENST00000577336 569 ntBASIC3.79□□□□□ -1.8
CD28P10747 DPRXP4-201ENST00000578053 568 ntBASIC3.79□□□□□ -1.8
CD28P10747 AP005262.1-201ENST00000582646 997 ntBASIC3.79□□□□□ -1.8
CD28P10747 MIR4697-201ENST00000582977 78 ntBASIC3.79□□□□□ -1.8
CD28P10747 SNORA35B-201ENST00000607417 129 ntBASIC3.79□□□□□ -1.8
CD28P10747 AC243960.7-201ENST00000623532 707 ntBASIC3.79□□□□□ -1.8
CD28P10747 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.79□□□□□ -1.8
CD28P10747 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD28P10747 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CD28P10747 MTCO1P15-201ENST00000529569 1526 ntBASIC3.79□□□□□ -1.8
CD28P10747 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD28P10747 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.79□□□□□ -1.8
CD28P10747 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD28P10747 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD28P10747 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CD28P10747 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.79□□□□□ -1.8
CD28P10747 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CD28P10747 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.78□□□□□ -1.8
CD28P10747 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.78□□□□□ -1.8
CD28P10747 RN7SKP74-201ENST00000362849 309 ntBASIC3.78□□□□□ -1.8
CD28P10747 SNORA73.1-201ENST00000363107 205 ntBASIC3.78□□□□□ -1.8
CD28P10747 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CD28P10747 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CD28P10747 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 RNU2-22P-201ENST00000411266 212 ntBASIC3.78□□□□□ -1.8
CD28P10747 RSU1P3-201ENST00000412878 835 ntBASIC3.78□□□□□ -1.8
CD28P10747 AC098592.2-201ENST00000413158 265 ntBASIC3.78□□□□□ -1.8
CD28P10747 AC114755.2-201ENST00000413520 361 ntBASIC3.78□□□□□ -1.8
CD28P10747 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.78□□□□□ -1.8
CD28P10747 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.78□□□□□ -1.8
CD28P10747 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.78□□□□□ -1.8
CD28P10747 AC000111.2-201ENST00000448200 210 ntBASIC3.78□□□□□ -1.8
CD28P10747 MTCYBP14-201ENST00000457471 715 ntBASIC3.78□□□□□ -1.8
CD28P10747 snoU13.1-201ENST00000459157 104 ntBASIC3.78□□□□□ -1.8
CD28P10747 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.78□□□□□ -1.8
CD28P10747 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 ENPP7P9-201ENST00000514456 627 ntBASIC3.78□□□□□ -1.8
CD28P10747 RN7SKP92-201ENST00000517266 244 ntBASIC3.78□□□□□ -1.8
CD28P10747 C1GALT1P3-201ENST00000522049 819 ntBASIC3.78□□□□□ -1.8
CD28P10747 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 AL049839.1-201ENST00000556151 657 ntBASIC3.78□□□□□ -1.8
CD28P10747 AL121839.1-201ENST00000556233 1185 ntBASIC3.78□□□□□ -1.8
CD28P10747 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 AP000919.1-201ENST00000582850 985 ntBASIC3.78□□□□□ -1.8
CD28P10747 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 AC104687.2-201ENST00000604442 342 ntBASIC3.78□□□□□ -1.8
CD28P10747 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
CD28P10747 AL022401.1-201ENST00000619498 108 ntBASIC3.78□□□□□ -1.8
CD28P10747 MIR6758-201ENST00000620653 63 ntBASIC3.78□□□□□ -1.8
CD28P10747 AC021106.3-201ENST00000623925 531 ntBASIC3.78□□□□□ -1.8
CD28P10747 CR381572.2-201ENST00000624852 397 ntBASIC3.78□□□□□ -1.8
CD28P10747 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD28P10747 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.78□□□□□ -1.8
CD28P10747 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.78□□□□□ -1.8
CD28P10747 RBPJP2-201ENST00000618187 1444 ntBASIC3.78□□□□□ -1.8
CD28P10747 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CD28P10747 TTC39DP-201ENST00000416781 1688 ntBASIC3.78□□□□□ -1.81
CD28P10747 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CD28P10747 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.77□□□□□ -1.81
CD28P10747 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CD28P10747 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.77□□□□□ -1.81
CD28P10747 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD28P10747 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.77□□□□□ -1.81
CD28P10747 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CD28P10747 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.77□□□□□ -1.81
CD28P10747 FABP12P1-201ENST00000401911 322 ntBASIC3.77□□□□□ -1.81
CD28P10747 CTSL3P-202ENST00000412179 788 ntBASIC3.77□□□□□ -1.81
CD28P10747 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.77□□□□□ -1.81
CD28P10747 FABP7P1-201ENST00000424004 391 ntBASIC3.77□□□□□ -1.81
CD28P10747 CENPIP1-201ENST00000425713 902 ntBASIC3.77□□□□□ -1.81
CD28P10747 EIF2S2P3-201ENST00000428356 999 ntBASIC3.77□□□□□ -1.81
CD28P10747 AC091390.1-201ENST00000433904 331 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms