Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC062016.2-201ENST00000420950 676 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.67□□□□□ -1.82
SSSCA1O60232 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.67□□□□□ -1.82
SSSCA1O60232 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 CDY14P-201ENST00000431260 1014 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 CDY12P-201ENST00000440679 1015 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 CDY13P-201ENST00000445813 1015 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.67□□□□□ -1.82
SSSCA1O60232 CDY23P-201ENST00000451661 1014 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 ISCUP1-201ENST00000454451 448 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.67□□□□□ -1.82
SSSCA1O60232 AC025445.1-201ENST00000502728 300 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.67□□□□□ -1.82
SSSCA1O60232 AC004980.4-201ENST00000513375 203 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.67□□□□□ -1.82
SSSCA1O60232 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 DYNLL1P4-201ENST00000549314 266 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC018552.1-201ENST00000562099 811 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.67□□□□□ -1.82
SSSCA1O60232 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 AL137072.1-201ENST00000603444 466 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC011453.2-201ENST00000603737 729 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.67□□□□□ -1.82
SSSCA1O60232 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSSCA1O60232 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSSCA1O60232 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SSSCA1O60232 ZNF733P-202ENST00000444809 1573 ntBASIC3.67□□□□□ -1.82
SSSCA1O60232 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSSCA1O60232 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SSSCA1O60232 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.66□□□□□ -1.82
SSSCA1O60232 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 OR10J6P-201ENST00000289731 930 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.66□□□□□ -1.82
SSSCA1O60232 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.66□□□□□ -1.82
SSSCA1O60232 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SSSCA1O60232 CXADRP1-201ENST00000398098 1095 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 HMGB3P7-201ENST00000400214 611 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.66□□□□□ -1.82
SSSCA1O60232 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 NPM1P4-201ENST00000414095 812 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC013470.3-201ENST00000420252 1194 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 AC079807.1-201ENST00000429993 481 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AL353748.1-201ENST00000440753 474 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 AC023141.9-201ENST00000458734 412 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC090114.3-201ENST00000479267 829 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 SNRPCP2-201ENST00000504370 475 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.66□□□□□ -1.82
SSSCA1O60232 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.66□□□□□ -1.82
SSSCA1O60232 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.66□□□□□ -1.82
SSSCA1O60232 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.66□□□□□ -1.82
SSSCA1O60232 MORF4L1P3-201ENST00000525966 950 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC125612.1-201ENST00000547580 377 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.66□□□□□ -1.82
SSSCA1O60232 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 AC090181.2-201ENST00000602975 672 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AL160290.3-201ENST00000604869 165 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AL512329.2-201ENST00000607350 548 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 CXADRP3-202ENST00000617265 1100 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AL023881.1-201ENST00000621088 301 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 AC007546.2-201ENST00000623996 360 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 VN2R3P-201ENST00000422626 1412 ntBASIC3.66□□□□□ -1.82
SSSCA1O60232 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.66□□□□□ -1.82
SSSCA1O60232 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
SSSCA1O60232 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSSCA1O60232 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SSSCA1O60232 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SSSCA1O60232 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SSSCA1O60232 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.82
SSSCA1O60232 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.65□□□□□ -1.82
SSSCA1O60232 AC099654.3-201ENST00000447087 1546 ntBASIC3.65□□□□□ -1.82
SSSCA1O60232 A2MP1-204ENST00000566278 4130 ntBASIC3.65□□□□□ -1.82
SSSCA1O60232 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.65□□□□□ -1.82
SSSCA1O60232 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSSCA1O60232 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.65□□□□□ -1.82
SSSCA1O60232 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SSSCA1O60232 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSSCA1O60232 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.65□□□□□ -1.82
SSSCA1O60232 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
SSSCA1O60232 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSSCA1O60232 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSSCA1O60232 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSSCA1O60232 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms