Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM38O00635 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM38O00635 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM38O00635 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 AL022311.1-201ENST00000623726 19416 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC010329.2-201ENST00000595195 2737 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
TRIM38O00635 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM38O00635 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRIM38O00635 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 RNA5SP319-201ENST00000362768 119 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 GAPDHP42-201ENST00000406848 981 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AL133482.1-201ENST00000415988 498 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 OR5M12P-201ENST00000423388 929 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC009784.1-201ENST00000426484 460 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 FTH1P16-201ENST00000435241 552 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 RPL7P29-201ENST00000437151 728 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 AC000041.1-201ENST00000439655 175 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 MED6P1-201ENST00000439659 713 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 NANOGP9-201ENST00000439890 892 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC019185.1-201ENST00000442718 389 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC008280.2-201ENST00000455473 307 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 PSAT1P4-201ENST00000466500 526 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC005532.2-201ENST00000467154 373 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 RN7SL583P-201ENST00000475692 287 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 NDUFA5P12-201ENST00000503796 343 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 PRELID3BP6-201ENST00000503839 571 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM38O00635 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC108471.1-201ENST00000513977 287 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM38O00635 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 DUXAP5-201ENST00000529668 529 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AP002812.4-201ENST00000532139 286 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM38O00635 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 HSPE1P2-201ENST00000554777 306 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM38O00635 ZNF971P-201ENST00000562068 1249 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 RN7SL622P-201ENST00000585292 275 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC069431.2-201ENST00000604149 1099 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AL445435.1-201ENST00000604232 665 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 AL512329.2-201ENST00000607350 548 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC096586.1-201ENST00000610267 561 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 AC009464.1-201ENST00000615731 469 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 STMN1P1-201ENST00000617809 440 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM38O00635 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 MRRFP1-201ENST00000435941 1675 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 AC073429.2-201ENST00000569694 1444 ntBASIC5.56□□□□□ -1.52
TRIM38O00635 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM38O00635 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 AP004607.3-201ENST00000530354 3915 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
TRIM38O00635 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM38O00635 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM38O00635 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM38O00635 CYCSP12-201ENST00000437729 300 ntBASIC5.55□□□□□ -1.52
TRIM38O00635 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM38O00635 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM38O00635 AL359265.1-201ENST00000440296 795 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms