Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDLIM1O00151 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 RNA5SP52-201ENST00000362448 134 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDLIM1O00151 MIR1286-201ENST00000408112 78 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AL133325.1-201ENST00000421090 382 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 DYNLL1P7-201ENST00000429273 258 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 RPL7L1P9-201ENST00000431298 745 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 CYCSP6-201ENST00000434498 302 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AC011753.3-201ENST00000443436 406 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AL451050.1-201ENST00000450126 415 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AC091180.1-201ENST00000462104 372 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AC105918.1-201ENST00000474399 838 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 RPL7P6-201ENST00000480903 738 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AC097173.1-201ENST00000505862 819 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
PDLIM1O00151 RNA5SP392-201ENST00000516905 112 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 SEC11B-201ENST00000518383 499 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AL049830.4-201ENST00000555149 351 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AC067805.1-201ENST00000559344 470 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AC027281.1-201ENST00000574178 758 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 RBM22P1-201ENST00000578589 1214 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM1O00151 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AC016911.1-201ENST00000613297 452 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 MIR6826-201ENST00000617808 98 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM1O00151 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM1O00151 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.75□□□□□ -1.65
PDLIM1O00151 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM1O00151 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM1O00151 AC107027.3-201ENST00000565095 3473 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC235565.1-201ENST00000456962 1325 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDLIM1O00151 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 TRIM60P17-201ENST00000415181 719 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 BX510359.3-201ENST00000422168 306 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 CKS1BP6-201ENST00000424932 240 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 COX6CP13-201ENST00000428703 226 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.74□□□□□ -1.65
PDLIM1O00151 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 RPS11P7-201ENST00000442125 465 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 RPL31P20-201ENST00000449593 360 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 NPM1P39-201ENST00000449818 867 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 RHEBP2-201ENST00000450289 600 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC018638.3-201ENST00000461273 132 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 RPS26P28-201ENST00000470806 348 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 PGBD4P4-201ENST00000509673 613 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC018797.3-201ENST00000513388 1241 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC117525.1-201ENST00000515228 503 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 HMGB1P40-201ENST00000525121 540 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.74□□□□□ -1.65
PDLIM1O00151 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM1O00151 SUMO2P15-201ENST00000604285 278 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 AC100814.1-201ENST00000606963 623 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.74□□□□□ -1.65
PDLIM1O00151 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
PDLIM1O00151 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PDLIM1O00151 CR788268.1-201ENST00000603931 1809 ntBASIC4.74□□□□□ -1.65
PDLIM1O00151 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDLIM1O00151 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM1O00151 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
PDLIM1O00151 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AC068446.1-201ENST00000556425 1549 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 AC087565.3-202ENST00000642085 1603 ntBASIC4.73□□□□□ -1.65
PDLIM1O00151 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM1O00151 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.73□□□□□ -1.65
PDLIM1O00151 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM1O00151 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDLIM1O00151 MIR105-1-201ENST00000385222 81 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms