Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC188H7C350 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AL359715.4-201ENST00000606629 1436 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC188H7C350 RAD1P1-201ENST00000231383 813 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC188H7C350 RNA5SP183-201ENST00000362452 119 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC188H7C350 RNU6-244P-201ENST00000391028 104 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC188H7C350 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC188H7C350 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AC007000.2-201ENST00000442564 487 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 OR7E125P-201ENST00000443450 846 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 PPIAP20-201ENST00000449839 135 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 YWHAEP1-201ENST00000453697 763 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 DEFB109F-201ENST00000491870 277 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 MTND2P31-201ENST00000512602 616 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 OR4A46P-201ENST00000527255 933 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 NMNAT1P1-201ENST00000554095 876 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC022404.1-201ENST00000555320 273 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AC005520.3-201ENST00000602874 370 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC095055.1-201ENST00000603472 1113 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC015849.2-201ENST00000605738 409 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AC242628.1-201ENST00000606810 391 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC012557.1-201ENST00000607115 611 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC188H7C350 RN7SL787P-201ENST00000613000 284 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 MIR6862-1-201ENST00000613016 70 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC188H7C350 MIR6862-2-201ENST00000614755 70 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC005840.5-201ENST00000619166 599 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 AC019206.1-201ENST00000621938 425 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 AC015804.1-201ENST00000622935 435 ntBASIC5.09□□□□□ -1.59
CCDC188H7C350 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC188H7C350 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC188H7C350 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC188H7C350 AC133552.1-201ENST00000569988 4007 ntBASIC5.09□□□□□ -1.6
CCDC188H7C350 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC188H7C350 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC188H7C350 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC188H7C350 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC188H7C350 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC188H7C350 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC083843.3-201ENST00000623679 2186 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC108751.5-201ENST00000492880 1336 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 RNU6-666P-201ENST00000363499 107 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 SNORD96B-201ENST00000386148 79 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 CEACAMP8-201ENST00000413902 580 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 IPPKP1-201ENST00000422501 768 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 DDX39BP1-205ENST00000422507 192 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 MTND4P15-201ENST00000437913 1033 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AP000936.3-201ENST00000438127 255 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AP000281.1-201ENST00000444036 316 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC188H7C350 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC104651.2-201ENST00000447549 528 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC009127.1-201ENST00000467090 155 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC104971.1-201ENST00000495117 578 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 SUMO1P1-201ENST00000497904 306 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 RN7SKP260-201ENST00000516907 149 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC188H7C350 IGLVIV-64-201ENST00000518581 301 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms