Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC091178.1-203ENST00000584586 279 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC011487.3-201ENST00000593607 453 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC005520.3-201ENST00000602874 370 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 ABI1P1-201ENST00000603375 1120 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 IGKV2OR2-2-201ENST00000605025 300 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AL592504.1-201ENST00000605319 439 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC012603.1-201ENST00000606424 528 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR486-1-201ENST00000612171 68 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR6741-201ENST00000618782 63 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AC087565.3-203ENST00000641018 837 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 PRO1804-201ENST00000623780 2050 ntBASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CHKB-CPT1BH3BT56 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 ARHGAP42P3-201ENST00000443989 2508 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 SEPT7P7-201ENST00000420492 1301 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RNU1-15P-201ENST00000353977 144 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RNA5SP388-201ENST00000362584 119 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RNA5SP232-201ENST00000364144 119 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RNA5SP90-201ENST00000364801 99 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RNA5SP22-201ENST00000365393 109 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 SNORA70.10-201ENST00000384515 134 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 DPPA2P3-201ENST00000411853 655 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 BMS1P17-202ENST00000416720 316 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AIMP1P1-201ENST00000418670 937 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC069154.1-201ENST00000432914 542 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 PRPF38AP2-201ENST00000438179 851 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC064862.5-201ENST00000440618 334 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AL353093.1-201ENST00000441292 436 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC068491.1-201ENST00000449539 1241 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RBMY2EP-202ENST00000456360 940 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL7P48-201ENST00000461513 746 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL23AP62-201ENST00000463396 453 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL7AP6-201ENST00000477943 801 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC015524.1-201ENST00000491585 472 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 CBX1-205ENST00000495350 550 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 SNORA74.1-201ENST00000516320 180 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC090151.1-201ENST00000520784 730 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC084851.2-201ENST00000530377 364 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 PDCL2P2-201ENST00000533651 189 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC092332.1-201ENST00000563684 829 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC079171.1-201ENST00000568788 914 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 STARD6-204ENST00000584040 660 ntTSL 3 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC090774.2-201ENST00000584708 322 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC012616.1-201ENST00000600294 197 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AL592436.1-201ENST00000605135 558 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC012676.3-201ENST00000614983 479 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AL049794.2-201ENST00000616301 365 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AL121985.3-201ENST00000620690 523 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 TEX41-254ENST00000626394 423 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AC007603.3-201ENST00000636915 979 ntBASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.51□□□□□ -2.01
CHKB-CPT1BH3BT56 BRAFP1-201ENST00000445336 2703 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms