Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC010132.2-201ENST00000295493 1043 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 SNORD74.4-201ENST00000364129 80 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 RN7SKP269-201ENST00000365545 319 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 ATP5F1P2-201ENST00000398143 760 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL021331.1-201ENST00000402817 582 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 RNU2-50P-201ENST00000410494 143 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 RPS26P47-201ENST00000427219 348 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 SKP1P3-201ENST00000429280 487 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 BX323845.1-201ENST00000432417 179 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL353597.2-202ENST00000434901 373 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 CYCSP11-201ENST00000436426 315 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC064862.4-201ENST00000442180 334 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 SEPT7P6-201ENST00000469999 1143 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 CCNHP1-201ENST00000513311 678 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 RNU6-319P-201ENST00000516025 108 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC090151.1-201ENST00000520784 730 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC005000.1-201ENST00000536192 288 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 BLZF2P-201ENST00000553776 1130 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC015912.2-201ENST00000571053 181 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC012146.2-201ENST00000576545 416 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 RBM22P1-201ENST00000578589 1214 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 SNORA74C-1-201ENST00000580726 201 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL589935.2-201ENST00000616471 1231 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL691477.1-201ENST00000624398 162 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AL133243.3-201ENST00000617415 3004 ntBASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.78□□□□□ -1.8
RBFOX3A6NFN3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
RBFOX3A6NFN3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 GCNT6-201ENST00000379591 934 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 MIR513A2-201ENST00000385249 127 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 MT-TP-201ENST00000387461 68 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AL034403.1-201ENST00000399414 885 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 MIR1182-201ENST00000408363 97 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AC092570.3-201ENST00000420113 693 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 NANOGP6-201ENST00000429190 847 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 UBE2V2P1-201ENST00000434717 398 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AL451139.1-201ENST00000434718 346 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 CALM1P2-201ENST00000452941 448 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 RN7SL174P-201ENST00000475578 289 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AC090142.2-201ENST00000483263 416 ntBASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.77□□□□□ -1.81
RBFOX3A6NFN3 HAUS1P1-201ENST00000505275 832 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms