Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF6Q9Y252 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF6Q9Y252 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
RNF6Q9Y252 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF6Q9Y252 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF6Q9Y252 SALL4P2-201ENST00000423288 2910 ntBASIC4.69□□□□□ -1.66
RNF6Q9Y252 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF6Q9Y252 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RNF6Q9Y252 THAP12P4-201ENST00000528321 2266 ntBASIC4.69□□□□□ -1.66
RNF6Q9Y252 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 PANDAR-201ENST00000629595 1506 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 INTS6P1-201ENST00000504674 2530 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 HMGB3P7-201ENST00000400214 611 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 ST13P16-201ENST00000401760 781 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 RN7SKP199-201ENST00000410325 305 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 OR51A6P-201ENST00000418680 1004 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AL360081.1-201ENST00000428299 555 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 TXNP2-201ENST00000443918 295 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC093166.2-201ENST00000455969 1017 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 HSPE1P22-201ENST00000456856 327 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 GYG1P1-201ENST00000460864 698 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC090686.1-201ENST00000481577 749 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC105233.1-201ENST00000498840 781 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC097173.1-201ENST00000505862 819 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 OR7E10P-201ENST00000526420 991 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC005868.1-201ENST00000536421 331 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC091905.4-201ENST00000623432 202 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC092747.4-201ENST00000620519 1861 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AC021242.1-201ENST00000507315 2035 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 MAPK10-349ENST00000641767 3661 ntBASIC4.68□□□□□ -1.66
RNF6Q9Y252 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF6Q9Y252 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RNF6Q9Y252 AP000542.2-201ENST00000623199 6179 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 SAMMSON-213ENST00000641336 1521 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 CASC19-221ENST00000641309 1382 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 COX6CP13-201ENST00000428703 226 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 ARL5AP3-201ENST00000439327 386 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 RPL31P44-201ENST00000447680 377 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 AL445433.1-201ENST00000457507 257 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC091180.1-201ENST00000462104 372 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC097484.1-201ENST00000471148 389 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 RPS29P22-201ENST00000472363 168 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 ENPP7P9-201ENST00000514456 627 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF6Q9Y252 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.67□□□□□ -1.66
RNF6Q9Y252 BMS1P7-201ENST00000602440 1052 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms