Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
CLIP2Q9UDT6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
CLIP2Q9UDT6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 RNA5SP345-201ENST00000410646 108 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 RN7SKP100-201ENST00000411258 284 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AL590139.1-201ENST00000416267 400 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 NRBF2P3-201ENST00000432731 865 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 RN7SL205P-201ENST00000490174 284 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 RPS27AP18-201ENST00000515536 459 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AC026688.1-201ENST00000520639 1168 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AL049839.1-201ENST00000556151 657 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 RN7SL52P-201ENST00000584271 284 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AC104687.2-201ENST00000604442 342 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 RN7SL722P-201ENST00000617780 284 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 RN7SL565P-201ENST00000618246 284 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 MIR7703-201ENST00000620784 77 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 CR381572.2-201ENST00000624852 397 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 NCLP2-201ENST00000416078 1462 ntBASIC5.71□□□□□ -1.5
CLIP2Q9UDT6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AL606537.1-201ENST00000607258 2011 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC068446.1-201ENST00000556425 1549 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 SALL4P2-201ENST00000423288 2910 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC008758.3-201ENST00000507003 1829 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC012519.1-201ENST00000424588 610 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 TRGV7-201ENST00000427089 353 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 RPS26P4-201ENST00000431743 355 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 MTCO3P17-201ENST00000443775 513 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC093166.2-201ENST00000455969 1017 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AP000942.1-201ENST00000463969 747 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC098583.1-201ENST00000480875 255 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 TRBV8-1-201ENST00000481590 279 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 RNA5SP249-201ENST00000516127 99 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC079075.1-201ENST00000559543 878 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC116553.2-201ENST00000564203 463 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 MIR4330-201ENST00000579077 105 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AP000919.1-201ENST00000582850 985 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AC124856.1-201ENST00000600819 896 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 AL133406.3-201ENST00000606817 541 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 FAM27B-201ENST00000610601 213 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 MIR8069-1-201ENST00000616627 86 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 MIR8069-2-201ENST00000621412 86 ntBASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLIP2Q9UDT6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP2Q9UDT6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms