Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC092807.2-201ENST00000609367 243 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 U6.107-201ENST00000637108 79 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC241584.2-201ENST00000637142 2090 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 DDX10P2-201ENST00000417796 2614 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC016251.2-201ENST00000623393 3089 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CUEDC1Q9NWM3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CUEDC1Q9NWM3 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.02□□□□□ -1.28
CUEDC1Q9NWM3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 RBPJP6-201ENST00000411556 1431 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 ASNSP6-201ENST00000592770 1618 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 RNU6-543P-201ENST00000362576 108 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 Y_RNA.579-201ENST00000390939 94 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 Y_RNA.605-201ENST00000410577 105 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 SNRPFP1-201ENST00000414761 252 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 MTCYBP8-201ENST00000422855 651 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 CBX3P6-201ENST00000430257 527 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 GAPDHP19-201ENST00000431768 1005 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 SUMO1P3-201ENST00000439961 304 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AL356121.1-201ENST00000442911 156 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC135721.2-201ENST00000464237 300 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC091564.1-201ENST00000464563 479 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 TRBV8-2-201ENST00000475637 270 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC099521.1-201ENST00000482557 334 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AF213884.1-201ENST00000488102 463 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 CHCHD2P7-201ENST00000508008 452 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC013283.1-201ENST00000557282 492 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC055876.1-202ENST00000567053 138 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 RPS7P1-201ENST00000571702 585 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC015801.1-201ENST00000585651 153 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AL109918.3-201ENST00000603072 338 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AL365434.2-201ENST00000607979 234 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AL683826.1-201ENST00000624104 627 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AC138649.5-201ENST00000637456 137 ntBASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CUEDC1Q9NWM3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 AC005225.5-201ENST00000623547 2225 ntBASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.01□□□□□ -1.29
CUEDC1Q9NWM3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms