Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDLIM7Q9NR12 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.48□□□□□ -1.37
PDLIM7Q9NR12 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AL672167.2-201ENST00000377164 879 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 MIR550A3-201ENST00000390735 95 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AL590084.2-201ENST00000401481 382 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AL121977.1-201ENST00000401636 979 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AL390774.1-201ENST00000411924 246 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC234781.4-201ENST00000419384 244 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC246680.2-201ENST00000422106 389 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC244035.1-201ENST00000430042 390 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 MTATP6P13-201ENST00000438531 667 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AP000936.2-201ENST00000447151 681 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 FRG2FP-204ENST00000453982 852 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC108161.1-201ENST00000461060 402 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC079841.1-201ENST00000481228 950 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC099521.1-201ENST00000482557 334 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC068724.1-201ENST00000487100 792 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC090058.1-201ENST00000498788 435 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 HPRT1P2-201ENST00000505250 544 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 RNU6-720P-201ENST00000516363 108 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 NBEAP1-201ENST00000554452 979 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 RN7SL708P-201ENST00000580952 299 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC006115.2-201ENST00000596823 202 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC021749.1-201ENST00000604322 607 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AL159169.2-201ENST00000610061 1269 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 FP325313.1-201ENST00000638228 703 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 AC114786.1-201ENST00000512892 1415 ntBASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.47□□□□□ -1.37
PDLIM7Q9NR12 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 MRE11P1-201ENST00000464884 2127 ntBASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDLIM7Q9NR12 AC068769.1-201ENST00000474767 2426 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 RNU6-1215P-201ENST00000384441 102 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 RPL23AP17-201ENST00000401064 499 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 RAP1BP3-201ENST00000407180 549 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 Z75741.2-201ENST00000417272 1167 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 RBMY2KP-201ENST00000418221 992 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AC006960.1-201ENST00000419980 153 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AC113412.1-201ENST00000425840 504 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 FABP7P2-201ENST00000429946 379 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 MTATP6P23-201ENST00000440153 476 ntBASIC6.46□□□□□ -1.38
PDLIM7Q9NR12 AL353572.1-201ENST00000442490 417 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms