Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 SNORA70.2-201ENST00000364506 135 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 HMGB3P7-201ENST00000400214 611 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 AC068287.1-201ENST00000430283 295 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 AC234781.3-201ENST00000452540 973 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 BTF3P13-201ENST00000513224 490 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 ATP5J2P6-201ENST00000565203 266 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 RN7SL802P-201ENST00000577858 299 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 RNF138P2-201ENST00000603490 592 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 AL133406.3-201ENST00000606817 541 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 IRF5P1-201ENST00000504852 2164 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 SAMMSON-213ENST00000641336 1521 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 SAMMSON-226ENST00000642089 1582 ntBASIC5.67□□□□□ -1.5
UPF3BQ9BZI7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AL359922.3-201ENST00000624779 1670 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 SMG1P6-201ENST00000532337 2930 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 RNU6-398P-201ENST00000384143 109 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 RNU1-82P-201ENST00000390851 165 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AL080315.1-201ENST00000406055 466 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 RN7SKP27-201ENST00000410684 333 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 OR2B7P-201ENST00000429302 934 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC008072.1-201ENST00000434254 824 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC112498.1-201ENST00000444401 332 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AL445433.1-201ENST00000457507 257 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 CYCSP34-201ENST00000458172 304 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 RPS23P7-201ENST00000466210 444 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC096741.1-201ENST00000472250 846 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC136624.4-201ENST00000573044 370 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC022726.1-201ENST00000587475 207 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AP001521.2-201ENST00000608772 546 ntBASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPF3BQ9BZI7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 MIPEPP2-201ENST00000422560 1819 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 SNORD96B-201ENST00000386148 79 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 GAPDHP15-201ENST00000398586 975 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 RPL17P36-201ENST00000420302 549 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 OR2AM1P-201ENST00000422137 422 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 MRPL48P1-201ENST00000445390 636 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 RPS4XP18-201ENST00000495480 763 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AC073358.1-201ENST00000505671 684 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AC091868.1-201ENST00000508746 304 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 OR5AN2P-201ENST00000534535 896 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 MIR5699-201ENST00000578903 90 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AC083809.1-201ENST00000615051 472 ntBASIC5.65□□□□□ -1.5
UPF3BQ9BZI7 AL359757.1-201ENST00000623176 255 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms