Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC103843.2-201ENST00000530523 682 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC026458.1-201ENST00000564330 438 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 BNIP3P16-201ENST00000589779 534 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AL513327.3-201ENST00000602618 469 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AL096855.2-201ENST00000605785 369 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 RN7SL760P-201ENST00000607344 270 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC006157.1-201ENST00000611750 366 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 U2.1-201ENST00000618978 145 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC005899.6-201ENST00000620729 297 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC026336.5-201ENST00000624455 738 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 API5P2-201ENST00000397055 1498 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC012213.2-201ENST00000562917 4597 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 Y_RNA.153-201ENST00000363615 91 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 CST13P-201ENST00000376992 428 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 RNU6-316P-201ENST00000391027 107 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 Y_RNA.646-201ENST00000410980 101 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 RNU2-64P-201ENST00000411315 191 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 OFD1P1Y-201ENST00000411756 1225 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC093107.1-201ENST00000422772 609 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 RPS29P15-201ENST00000458329 171 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC108688.1-201ENST00000485817 713 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC002456.2-201ENST00000509356 380 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 NACAP6-201ENST00000509572 622 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC021146.1-201ENST00000511202 716 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 RNU6-488P-201ENST00000515918 99 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 RNU6-1038P-201ENST00000516516 104 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC105031.1-201ENST00000518550 476 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 RPL10P19-201ENST00000519013 301 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AP000827.1-201ENST00000527814 258 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AP000857.1-201ENST00000532151 543 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 AL118558.2-201ENST00000556294 238 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 MIR3680-2-201ENST00000578247 87 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 MIR3680-1-201ENST00000581433 87 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 BNIP3P25-201ENST00000596023 559 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC008687.2-201ENST00000597865 520 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 RPL23AP90-201ENST00000603820 236 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 RN7SL840P-201ENST00000606883 284 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC063962.1-201ENST00000608199 521 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 MIR8075-201ENST00000614354 80 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 MIR6723-201ENST00000621981 89 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 BX322650.1-201ENST00000332359 2143 ntBASIC7.07□□□□□ -1.28
USB1Q9BQ65 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms