Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC018618.2-201ENST00000604770 446 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC079610.2-201ENST00000604818 690 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC010435.1-201ENST00000623353 1177 ntBASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP3Q96JB5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC109446.4-201ENST00000623235 2755 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 RNU1-19P-201ENST00000363306 165 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 U6.112-201ENST00000384129 70 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AF228730.1-201ENST00000397972 663 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AP002530.1-201ENST00000405705 684 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 GPS2P1-201ENST00000411761 986 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 MTATP6P20-201ENST00000414147 562 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 NANOGP5-201ENST00000424456 877 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 MTND2P5-201ENST00000432656 1006 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AL035246.1-201ENST00000433554 1255 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 RPS11P7-201ENST00000442125 465 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC022431.1-201ENST00000450941 438 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AP000797.2-201ENST00000475768 606 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 RPS4XP6-201ENST00000477670 797 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 RN7SL547P-201ENST00000490793 290 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 RN7SL447P-201ENST00000494711 245 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AL136038.1-201ENST00000497246 351 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC105233.1-201ENST00000498840 781 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC020699.1-201ENST00000505161 445 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 HPRT1P1-201ENST00000509498 657 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC147055.3-201ENST00000510547 851 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AL671862.1-201ENST00000515851 349 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 HMGB1P40-201ENST00000525121 540 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 OR4A43P-201ENST00000532938 908 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 BLZF2P-201ENST00000553776 1130 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 ZNF971P-201ENST00000562068 1249 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AL450336.1-201ENST00000605180 586 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 RNU4-5P-201ENST00000607255 135 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 RNA5SP439-201ENST00000617595 124 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC009159.2-201ENST00000617603 606 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AC006963.1-201ENST00000624003 1052 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 AL603750.1-201ENST00000624216 1717 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.04□□□□□ -1.44
CDK5RAP3Q96JB5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 MIR133B-201ENST00000362210 119 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 RNA5SP487-201ENST00000410186 122 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AL592310.1-201ENST00000414330 671 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms