Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4AQ8WYN0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC015689.2-201ENST00000528172 1738 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL133268.1-201ENST00000405676 1401 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 MTCO1P18-201ENST00000455518 1419 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 RN7SKP292-201ENST00000365522 317 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 RNU4-2-201ENST00000365668 141 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 SNORD116-12-201ENST00000384468 92 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL133388.1-201ENST00000404509 287 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC010385.1-201ENST00000412374 256 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL513175.2-201ENST00000422071 443 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL117351.1-201ENST00000438864 766 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL589880.1-201ENST00000448271 287 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 RN7SL814P-201ENST00000487715 300 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 RN7SKP99-201ENST00000517028 307 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC100784.1-201ENST00000522790 310 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC009094.1-201ENST00000564443 426 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC022884.2-201ENST00000578535 580 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC069304.3-201ENST00000603938 1084 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC005377.1-201ENST00000605126 456 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AL121895.2-201ENST00000619558 447 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 CU639417.4-201ENST00000623928 207 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC004817.4-201ENST00000602396 3625 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 SMG1P7-201ENST00000565246 2704 ntBASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4AQ8WYN0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 OR9K1P-201ENST00000326513 941 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 ANKRD36P1-201ENST00000344424 659 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AL672167.2-201ENST00000377164 879 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 Y_RNA.578-201ENST00000390903 88 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 RNU6-1242P-201ENST00000391052 103 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 RPL21P67-201ENST00000402896 478 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 RPL34P3-201ENST00000421454 338 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC093716.1-201ENST00000435923 377 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 MRPL35P2-201ENST00000448009 511 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 RPS6P2-201ENST00000454208 705 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AL049874.2-201ENST00000492636 288 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC074087.1-201ENST00000512059 724 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 NRBF2P4-201ENST00000520874 850 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC138832.1-201ENST00000522871 556 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC061975.8-201ENST00000587058 721 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AL049844.2-201ENST00000604280 628 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC011626.1-201ENST00000604710 562 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC018618.2-201ENST00000604770 446 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC100847.1-201ENST00000611316 481 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AL121890.3-201ENST00000618494 516 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 AC010975.3-201ENST00000618727 978 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms