Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN4IP1Q8WWV3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RTN4IP1Q8WWV3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTN4IP1Q8WWV3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN4IP1Q8WWV3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AL136164.3-201ENST00000624429 3978 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC099654.2-201ENST00000433031 1980 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 RN7SKP104-201ENST00000362605 328 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 SNORA70-201ENST00000384436 135 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 DPPA2P3-201ENST00000411853 655 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 TBCAP2-201ENST00000416175 326 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 RPS6P2-201ENST00000454208 705 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 RPL23AP65-201ENST00000475608 468 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 RPL7AP6-201ENST00000477943 801 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC098583.1-201ENST00000480875 255 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 STMN1P2-201ENST00000508435 439 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC124856.1-201ENST00000600819 896 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC016769.4-201ENST00000616893 535 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC091905.4-201ENST00000623432 202 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AL121950.1-201ENST00000624993 2077 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 AC245100.2-201ENST00000454544 1679 ntBASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN4IP1Q8WWV3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
RTN4IP1Q8WWV3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
RTN4IP1Q8WWV3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
RTN4IP1Q8WWV3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 HSPD1P14-201ENST00000432666 1618 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 OR56B2P-201ENST00000317102 954 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 GAPDHP15-201ENST00000398586 975 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 RNA5SP345-201ENST00000410646 108 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 RNA5SP146-201ENST00000410743 123 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 GTF2IP5-201ENST00000414608 731 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 RBMY2QP-201ENST00000429799 1147 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 RPL7P11-201ENST00000437586 658 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 PRPF38AP2-201ENST00000438179 851 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AC073587.1-201ENST00000447093 876 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 RPL7L1P1-201ENST00000448259 785 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AC110749.1-201ENST00000462007 357 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AC108022.1-201ENST00000493466 478 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 MRPS33P2-201ENST00000507850 322 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AC022882.1-201ENST00000532142 501 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 FKBP1BP1-201ENST00000553366 325 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 AL049839.1-201ENST00000556151 657 ntBASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.96□□□□□ -1.78
RTN4IP1Q8WWV3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms