Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC234772.1-201ENST00000377927 937 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 RNU6-468P-201ENST00000384003 109 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 MIR621-201ENST00000384919 96 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AL078599.1-201ENST00000402075 293 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 SDHDP6-201ENST00000414693 480 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 UBE2V1P9-201ENST00000414760 368 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC012519.1-201ENST00000424588 610 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 PRUNEP1-201ENST00000425846 705 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 NPM1P22-201ENST00000427761 952 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AL389925.1-201ENST00000432257 728 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC092447.2-201ENST00000435487 669 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC012075.1-201ENST00000436549 580 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 MTCO2P20-201ENST00000437339 673 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 MED6P1-201ENST00000439659 713 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AP000281.1-201ENST00000444036 316 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC044797.1-201ENST00000445744 679 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AL031313.1-201ENST00000448435 256 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 PRPF38AP1-201ENST00000451976 933 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 RN7SL273P-201ENST00000481561 299 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 SUMO1P1-201ENST00000497904 306 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 MTCYBP35-201ENST00000503630 1137 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC005351.1-201ENST00000511152 786 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC112673.1-201ENST00000513168 575 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 BLZF2P-201ENST00000553776 1130 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC040958.1-201ENST00000561102 201 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 NDUFA5P11-201ENST00000567995 343 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 NIFKP6-201ENST00000598115 845 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AP004372.1-201ENST00000604842 844 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AP002802.2-201ENST00000605877 235 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC005021.1-201ENST00000608730 355 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AL355493.4-201ENST00000618530 292 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC015871.5-202ENST00000623252 701 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AC245100.2-201ENST00000454544 1679 ntBASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP4Q8N3C7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP4Q8N3C7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP4Q8N3C7 MTND5P23-201ENST00000430812 1655 ntBASIC4.9□□□□□ -1.62
CLIP4Q8N3C7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.9□□□□□ -1.62
CLIP4Q8N3C7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 AC010132.2-201ENST00000295493 1043 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 MIR133B-201ENST00000362210 119 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 RNU4-40P-201ENST00000364351 143 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 RNU6-481P-201ENST00000384194 107 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 SNORD65-201ENST00000391079 73 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 MTATP6P20-201ENST00000414147 562 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 COX5BP7-201ENST00000414780 274 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 MTCO1P43-201ENST00000431831 488 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 BX119904.1-201ENST00000432026 348 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 SETP8-201ENST00000435341 628 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 FABP5P3-201ENST00000437960 408 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 AL138899.2-201ENST00000439139 499 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 AL161722.1-201ENST00000446972 1032 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 GAPDHP25-201ENST00000447061 1001 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 YWHAEP1-201ENST00000453697 763 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 SNORD11.1-201ENST00000459482 85 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 CBX1P5-201ENST00000475330 559 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 RPL7P41-201ENST00000485823 957 ntBASIC4.9□□□□□ -1.63
CLIP4Q8N3C7 NIFKP7-201ENST00000503365 834 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms