Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC141002.1-201ENST00000607025 279 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC010678.1-201ENST00000614118 713 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC009509.4-201ENST00000619202 509 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC011477.1-204ENST00000623416 1325 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 HDAC1P2-201ENST00000453661 1398 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 RN7SKP161-201ENST00000411110 305 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 TPMTP3-201ENST00000411928 735 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 FCF1P9-201ENST00000412546 282 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL096829.1-201ENST00000413677 457 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC007568.1-201ENST00000422912 471 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC079807.1-201ENST00000429993 481 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 CDY14P-201ENST00000431260 1014 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL357520.1-201ENST00000441557 453 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL022237.1-201ENST00000446663 358 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 CDY23P-201ENST00000451661 1014 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 DNAJC19P8-201ENST00000452887 259 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC103563.5-201ENST00000455643 364 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC109458.1-201ENST00000508858 316 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC109445.1-201ENST00000512356 383 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 NPM1P21-201ENST00000513394 762 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 RNA5SP340-201ENST00000517132 107 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC124293.1-201ENST00000530034 493 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 OR4C2P-201ENST00000530855 1064 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL121834.1-201ENST00000572284 509 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 MTND1P15-201ENST00000579262 949 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC107982.3-201ENST00000584957 985 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC090236.2-201ENST00000587933 1101 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC004890.3-201ENST00000605566 1095 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL031775.1-201ENST00000607014 887 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC015982.1-201ENST00000608113 465 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AL365181.4-201ENST00000609800 547 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC069209.1-201ENST00000619282 651 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 AC024884.1-201ENST00000620583 399 ntBASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM48Q8IWZ4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms