Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RPS4XP18-201ENST00000495480 763 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AP002981.1-201ENST00000517692 975 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AC011487.3-201ENST00000593607 453 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AC073137.1-201ENST00000605636 634 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AP002967.1-201ENST00000624203 539 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 AL442639.1-201ENST00000625030 1899 ntBASIC4.86□□□□□ -1.63
CDKL3Q8IVW4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 RNA5SP123-201ENST00000363244 119 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 RNU6-233P-201ENST00000410845 141 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 OR2AM1P-201ENST00000422137 422 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC012519.1-201ENST00000424588 610 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC079168.2-201ENST00000453977 416 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC026348.1-201ENST00000462549 1053 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 RPL23AP37-201ENST00000479658 549 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC008638.1-201ENST00000506035 866 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 BTF3P13-201ENST00000513224 490 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 RN7SKP34-201ENST00000516142 244 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 MIR4443-201ENST00000585052 53 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC133552.5-201ENST00000604266 540 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AL031119.1-201ENST00000404707 1879 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AL450326.2-201ENST00000421913 1962 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 AC083843.3-201ENST00000623679 2186 ntBASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
CDKL3Q8IVW4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 DDX18P3-201ENST00000404856 2007 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 RN7SKP104-201ENST00000362605 328 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AL512430.2-201ENST00000406786 339 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 FABP7P1-201ENST00000424004 391 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC090142.1-201ENST00000465776 462 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 RPL7AP6-201ENST00000477943 801 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 BTG4P1-201ENST00000510421 183 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC008033.2-201ENST00000542626 177 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC051619.2-201ENST00000559063 397 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC015912.2-201ENST00000571053 181 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC013244.1-201ENST00000604279 193 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AL159169.2-201ENST00000610061 1269 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AL589935.2-201ENST00000616471 1231 ntBASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
CDKL3Q8IVW4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDKL3Q8IVW4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.84□□□□□ -1.64
CDKL3Q8IVW4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms