Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 MIR4311-201ENST00000580794 100 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC072039.2-201ENST00000608883 439 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 LINC02019-201ENST00000608605 2060 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC111188.2-201ENST00000529697 1387 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 RNA5SP46-201ENST00000362370 120 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 RNU6-1005P-201ENST00000384519 107 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 RPSAP35-201ENST00000413753 818 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AL596448.1-201ENST00000415024 392 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 RPL34P3-201ENST00000421454 338 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC006366.1-201ENST00000422002 759 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC113412.1-201ENST00000425840 504 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 TMEM183AP1-205ENST00000432739 290 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 FMO7P-201ENST00000436045 768 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 RPS24P1-201ENST00000438550 371 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AP000281.1-201ENST00000444036 316 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 HMGB3P6-201ENST00000444896 598 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AL596266.1-201ENST00000448132 400 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 RPL31P15-201ENST00000449770 338 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 RPS4XP6-201ENST00000477670 797 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 RPL7P41-201ENST00000485823 957 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC090058.1-201ENST00000498788 435 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC109481.1-201ENST00000509173 282 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC112191.2-201ENST00000522428 333 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC068135.2-201ENST00000569293 1028 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC010547.6-201ENST00000571789 193 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC015688.2-201ENST00000584523 262 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 VN1R90P-201ENST00000595717 726 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC073137.1-201ENST00000605636 634 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC024257.5-201ENST00000612739 531 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 RN7SL787P-201ENST00000613000 284 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC122133.1-201ENST00000613964 233 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC025574.2-201ENST00000615621 514 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC073968.1-201ENST00000618594 637 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC127024.6-201ENST00000621598 424 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 AL160394.1-201ENST00000624765 724 ntBASIC5.49□□□□□ -1.53
VRK3Q8IV63 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK3Q8IV63 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.49□□□□□ -1.53
VRK3Q8IV63 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms