Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AC119674.1-220ENST00000641502 1048 ntBASIC4.68□□□□□ -1.66
CCDC71Q8IV32 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71Q8IV32 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC027228.2-201ENST00000567141 2154 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 RNA5SP455-201ENST00000365190 119 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 SNORA79B-201ENST00000410557 148 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 GJA6P-201ENST00000415117 1042 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 TMBIM7P-201ENST00000418074 855 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL034379.1-201ENST00000423216 253 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL360081.1-201ENST00000428299 555 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 TXNP2-201ENST00000443918 295 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL031584.1-201ENST00000447169 754 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL445433.1-201ENST00000457507 257 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC105918.1-201ENST00000474399 838 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 BTG4P1-201ENST00000510421 183 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 RFPL4AP3-201ENST00000515267 345 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC116553.2-201ENST00000564203 463 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC124856.1-201ENST00000600819 896 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC015802.5-201ENST00000607478 399 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC084036.1-201ENST00000609190 508 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AP005131.7-201ENST00000610087 611 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 MIR8069-1-201ENST00000616627 86 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 MIR8069-2-201ENST00000621412 86 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 AC006840.1-201ENST00000623069 542 ntBASIC4.67□□□□□ -1.66
CCDC71Q8IV32 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71Q8IV32 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC092747.4-201ENST00000620519 1861 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 INTS6P1-201ENST00000504674 2530 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AL589655.1-201ENST00000405398 482 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC234781.4-201ENST00000419384 244 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC013470.3-201ENST00000420252 1194 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AL356806.1-201ENST00000422524 916 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AL161722.2-201ENST00000434731 981 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AL138787.1-202ENST00000437804 898 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AL606490.8-201ENST00000441624 319 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC073648.4-201ENST00000442655 781 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 RPL31P44-201ENST00000447680 377 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 RPL31P20-201ENST00000449593 360 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 MORF4L1P4-201ENST00000450245 976 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 RPS6P2-201ENST00000454208 705 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 RNU6-319P-201ENST00000516025 108 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC012400.1-201ENST00000518452 381 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AP003168.1-201ENST00000530091 307 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms