Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AL596275.2-207ENST00000641188 675 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 SMG1P7-201ENST00000565246 2704 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 SMG1P4-204ENST00000523028 4131 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC063976.2-201ENST00000425667 3556 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL731532.2-201ENST00000623542 1953 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL731566.1-201ENST00000620490 1937 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 MIR137-201ENST00000385223 102 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 RNU6-932P-201ENST00000391108 106 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 GAPDHP15-201ENST00000398586 975 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 DBIP1-201ENST00000401435 260 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AP002530.1-201ENST00000405705 684 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL034374.1-201ENST00000406329 351 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC092638.1-201ENST00000411966 1275 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 OR2AT2P-201ENST00000413438 905 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL133173.1-201ENST00000423458 397 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 DPY19L1P2-201ENST00000426647 915 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 RPS4XP16-201ENST00000427198 791 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL035246.1-201ENST00000433554 1255 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 YWHAZP2-201ENST00000440317 728 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 HSFY3P-201ENST00000444242 1191 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL161722.1-201ENST00000446972 1032 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC073909.1-201ENST00000447112 999 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC108161.1-201ENST00000461060 402 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 RN7SL346P-201ENST00000491561 294 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 RN7SKP287-201ENST00000516546 266 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 SNORA43.3-201ENST00000517240 103 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 OR10V3P-201ENST00000525712 725 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 LRRC34P1-201ENST00000542742 915 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AP002906.1-201ENST00000603405 233 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC093424.1-201ENST00000604999 338 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AL035461.2-201ENST00000619201 524 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 MIR6839-201ENST00000620425 113 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC004232.3-201ENST00000622977 525 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SHFQ7M4L6 AC114786.1-201ENST00000512892 1415 ntBASIC4.8□□□□□ -1.64
SHFQ7M4L6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHFQ7M4L6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 YES1P1-201ENST00000418510 1628 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHFQ7M4L6 OR52B3P-201ENST00000314715 928 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHFQ7M4L6 RN7SKP153-201ENST00000365026 316 ntBASIC4.79□□□□□ -1.64
SHFQ7M4L6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms