Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC021006.3-201ENST00000530771 192 ntBASIC4.58□□□□□ -1.68
RTL4Q6ZR62 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 AC019206.1-201ENST00000621938 425 ntBASIC4.58□□□□□ -1.68
RTL4Q6ZR62 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RTL4Q6ZR62 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AC107021.2-201ENST00000567714 2095 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AL035419.1-201ENST00000397037 564 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 RPS24P12-201ENST00000402084 394 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 EIF4A1P3-201ENST00000411521 244 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 RPL12P43-201ENST00000420608 499 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AL590609.2-201ENST00000421430 368 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 RPL7P11-201ENST00000437586 658 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 TXNP5-201ENST00000441043 315 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 HMGB1P4-201ENST00000455362 567 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 BTF3P13-201ENST00000513224 490 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 RNA5SP228-201ENST00000516232 133 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 DUX4L52-201ENST00000549363 777 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AC009117.1-201ENST00000563948 554 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 FAM25E-202ENST00000608562 189 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AL589935.2-201ENST00000616471 1231 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 AC087385.3-201ENST00000620477 187 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTL4Q6ZR62 ECM1P2-201ENST00000503354 1577 ntBASIC4.57□□□□□ -1.68
RTL4Q6ZR62 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC099654.2-201ENST00000433031 1980 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 IRF5P1-201ENST00000504852 2164 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 RBMY2KP-201ENST00000418221 992 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 SLC25A18P1-201ENST00000449385 454 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC112206.1-201ENST00000468416 477 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC092324.1-201ENST00000468671 324 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC090142.2-201ENST00000483263 416 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC073358.1-201ENST00000505671 684 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 GAPDHP56-201ENST00000506031 988 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 BGLT3-201ENST00000564523 994 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AP005119.2-201ENST00000579735 1105 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 MIR4480-201ENST00000582492 71 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 RN7SL52P-201ENST00000584271 284 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC087783.2-201ENST00000605070 562 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 AC100827.5-201ENST00000615883 426 ntBASIC4.56□□□□□ -1.68
RTL4Q6ZR62 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.56□□□□□ -1.68
RTL4Q6ZR62 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms