Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 SELENOWP1-201ENST00000322792 252 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 TMSB4XP4-201ENST00000323496 618 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC007618.1-201ENST00000366455 732 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC005042.1-201ENST00000393397 800 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 UBE2V1P11-201ENST00000411559 285 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AL590762.3-201ENST00000436372 640 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 NDUFS5P5-201ENST00000437256 321 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 HMGN1P36-201ENST00000446623 298 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC026348.1-201ENST00000462549 1053 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 RPL23AP73-201ENST00000492507 471 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 SNORA76.2-201ENST00000517095 137 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 OR8K2P-201ENST00000524645 927 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 OR4A2P-201ENST00000527276 913 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC134349.2-201ENST00000535136 910 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 ZNF92P2-201ENST00000600543 1059 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC027243.2-201ENST00000602530 724 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AL671309.1-201ENST00000603750 544 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC109309.2-201ENST00000612597 332 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AL021918.2-201ENST00000613415 194 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AL162574.2-201ENST00000614618 657 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 U6.107-201ENST00000637108 79 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AL445487.1-201ENST00000415694 1580 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 RNA5SP326-201ENST00000363209 110 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 RN7SKP292-201ENST00000365522 317 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 RNU6-796P-201ENST00000391086 107 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 OR6E1P-201ENST00000414424 923 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 MTND2P15-201ENST00000418575 892 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 TNPO1P1-201ENST00000423641 1138 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 PNRC2P1-201ENST00000423940 420 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AL121776.1-201ENST00000429337 372 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC016772.1-201ENST00000444170 1261 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 RN7SL717P-201ENST00000478343 297 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 COX6B1P6-201ENST00000522347 255 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 LSM3P2-201ENST00000551246 273 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC006349.1-201ENST00000555526 235 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AL356801.1-201ENST00000559320 294 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AP000919.1-202ENST00000581139 1264 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 PRPF19P1-201ENST00000584766 898 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 FAM27E4-201ENST00000605259 342 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC245389.2-201ENST00000616023 576 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC242843.1-201ENST00000618702 573 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 AC083865.1-201ENST00000636634 831 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 MTND5P11-201ENST00000511037 1812 ntBASIC4.73□□□□□ -1.65
C11orf88Q6PI97 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
C11orf88Q6PI97 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms