Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 RN7SKP74-201ENST00000362849 309 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 RNU6-31P-201ENST00000384388 108 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 RN7SKP114-201ENST00000410327 279 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 TMBIM7P-201ENST00000418074 855 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL590609.2-201ENST00000421430 368 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC245517.2-201ENST00000442890 346 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL163193.1-201ENST00000444895 788 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL589765.3-201ENST00000446084 462 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL031584.1-201ENST00000447169 754 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC092647.2-201ENST00000452998 253 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC090543.1-201ENST00000492168 485 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 SNRPCP2-201ENST00000504370 475 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC006499.3-201ENST00000506077 748 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 RNA5SP249-201ENST00000516127 99 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC107918.3-201ENST00000533272 382 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 TAS2R6P-201ENST00000605022 826 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC135803.1-201ENST00000608748 565 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AL121612.2-201ENST00000612261 482 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 RPSAP73-201ENST00000614820 330 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC009032.1-201ENST00000617574 431 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC022106.2-201ENST00000620114 757 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC068446.1-201ENST00000556425 1549 ntBASIC4.54□□□□□ -1.68
NIPAL3Q6P499 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NIPAL3Q6P499 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 CR788268.1-201ENST00000603931 1809 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 RNU6-178P-201ENST00000384631 104 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 MIR320B1-201ENST00000390209 79 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 SNORA68.2-201ENST00000391263 128 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC093719.1-202ENST00000392735 373 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 MIR1178-201ENST00000408396 91 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC005033.1-201ENST00000428904 813 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 TXNP5-201ENST00000441043 315 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC114878.1-201ENST00000441166 358 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 NDUFA5P8-201ENST00000449019 346 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AL691482.1-201ENST00000453255 87 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC110749.1-201ENST00000462007 357 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 RPS4XP14-201ENST00000493072 781 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 MIR3691-201ENST00000578066 90 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AP005262.1-201ENST00000582646 997 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC079791.1-201ENST00000605356 973 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 AC104820.1-201ENST00000624183 307 ntBASIC4.53□□□□□ -1.68
NIPAL3Q6P499 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NIPAL3Q6P499 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms