Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 AC021146.5-201ENST00000503544 545 ntBASIC4.19□□□□□ -1.74
LMO4P61968 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.19□□□□□ -1.74
LMO4P61968 MRPS33P2-201ENST00000507850 322 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AL671862.1-201ENST00000515851 349 ntBASIC4.19□□□□□ -1.74
LMO4P61968 RNA5SP228-201ENST00000516232 133 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 AC027176.2-201ENST00000559166 746 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC090888.2-201ENST00000559765 1144 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 AL390726.5-202ENST00000564800 256 ntBASIC4.19□□□□□ -1.74
LMO4P61968 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.19□□□□□ -1.74
LMO4P61968 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 MIR4737-201ENST00000583979 81 ntBASIC4.19□□□□□ -1.74
LMO4P61968 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 AC135178.6-201ENST00000605314 398 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AP001521.2-201ENST00000608772 546 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC093783.1-201ENST00000612976 329 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 Z99129.2-201ENST00000619967 314 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC068787.1-201ENST00000623908 691 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC019080.5-201ENST00000624891 757 ntBASIC4.19□□□□□ -1.74
LMO4P61968 AC092159.4-201ENST00000624944 550 ntBASIC4.19□□□□□ -1.74
LMO4P61968 TMEM30CP-203ENST00000637814 1035 ntBASIC4.19□□□□□ -1.74
LMO4P61968 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 AC132825.1-201ENST00000463573 2247 ntBASIC4.19□□□□□ -1.74
LMO4P61968 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
LMO4P61968 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 TTC41P-205ENST00000551270 3963 ntBASIC4.19□□□□□ -1.74
LMO4P61968 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LMO4P61968 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.19□□□□□ -1.74
LMO4P61968 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 RNU4-39P-201ENST00000362455 127 ntBASIC4.18□□□□□ -1.74
LMO4P61968 RNA5SP453-201ENST00000362503 119 ntBASIC4.18□□□□□ -1.74
LMO4P61968 SNORA56-201ENST00000383966 129 ntBASIC4.18□□□□□ -1.74
LMO4P61968 RNU6-1000P-201ENST00000391066 106 ntBASIC4.18□□□□□ -1.74
LMO4P61968 RNA5SP241-201ENST00000391326 114 ntBASIC4.18□□□□□ -1.74
LMO4P61968 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 CYB5AP4-201ENST00000396692 399 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AL034403.1-201ENST00000399414 885 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AL021331.1-201ENST00000402817 582 ntBASIC4.18□□□□□ -1.74
LMO4P61968 MTCO2P8-201ENST00000412213 658 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 HSPD1P12-201ENST00000429127 1069 ntBASIC4.18□□□□□ -1.74
LMO4P61968 BX276092.6-201ENST00000430476 250 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 MRPS33P4-201ENST00000434892 317 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC046176.1-201ENST00000435260 1170 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
LMO4P61968 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 BX276092.8-201ENST00000455722 250 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AP002345.1-201ENST00000456493 928 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC078857.1-201ENST00000469870 667 ntBASIC4.18□□□□□ -1.74
LMO4P61968 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 GAPDHP56-201ENST00000506031 988 ntBASIC4.18□□□□□ -1.74
LMO4P61968 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.18□□□□□ -1.74
LMO4P61968 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.18□□□□□ -1.74
LMO4P61968 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 VTA1P2-201ENST00000520205 911 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 AC092709.1-201ENST00000521355 1045 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms