Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HDAC4P56524 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HDAC4P56524 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HDAC4P56524 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HDAC4P56524 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.45□□□□□ -1.54
HDAC4P56524 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.44□□□□□ -1.54
HDAC4P56524 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.44□□□□□ -1.54
HDAC4P56524 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDAC4P56524 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC073136.1-201ENST00000449426 2884 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HDAC4P56524 RNA5SP90-201ENST00000364801 99 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDAC4P56524 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDAC4P56524 RNU1-74P-201ENST00000384108 171 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDAC4P56524 AC136624.1-201ENST00000400791 413 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AL035405.1-201ENST00000400795 710 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 RPL26P37-201ENST00000411983 438 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC007394.1-201ENST00000421941 531 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.44□□□□□ -1.54
HDAC4P56524 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 NANOGP4-201ENST00000427230 913 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 OR52B5P-201ENST00000435337 951 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 Z92846.1-201ENST00000456203 268 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 RN7SL189P-201ENST00000468631 289 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 RPS21P4-201ENST00000487122 248 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AC231760.1-201ENST00000498002 260 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 ENPP7P11-201ENST00000505915 627 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC093014.1-201ENST00000548926 724 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC022884.2-201ENST00000578535 580 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.44□□□□□ -1.54
HDAC4P56524 MTATP6P2-201ENST00000603319 678 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDAC4P56524 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC021106.3-201ENST00000623925 531 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 OR52B5P-202ENST00000641118 1110 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 MAPK10-349ENST00000641767 3661 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDAC4P56524 SPATA2P1-201ENST00000431223 2055 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.44□□□□□ -1.54
HDAC4P56524 AC011493.1-201ENST00000596753 1632 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AC235565.1-201ENST00000456962 1325 ntBASIC5.44□□□□□ -1.54
HDAC4P56524 AC025574.1-201ENST00000554784 1653 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.43□□□□□ -1.54
HDAC4P56524 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDAC4P56524 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
HDAC4P56524 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDAC4P56524 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDAC4P56524 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HDAC4P56524 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HDAC4P56524 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.43□□□□□ -1.54
HDAC4P56524 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDAC4P56524 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDAC4P56524 AL590806.1-201ENST00000415818 853 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 SLC35E1P1-201ENST00000419313 864 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.43□□□□□ -1.54
HDAC4P56524 RPS4XP16-201ENST00000427198 791 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.43□□□□□ -1.54
HDAC4P56524 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.43□□□□□ -1.54
HDAC4P56524 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.43□□□□□ -1.54
HDAC4P56524 TMX2P1-201ENST00000436507 708 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.43□□□□□ -1.54
HDAC4P56524 AC245047.2-201ENST00000441060 530 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 PRPF38AP1-201ENST00000451976 933 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AC018635.1-201ENST00000468292 1030 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 RPL32P9-201ENST00000487963 407 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 RN7SL205P-201ENST00000490174 284 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 RN7SL346P-201ENST00000491561 294 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AC119751.4-201ENST00000507498 357 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.43□□□□□ -1.54
HDAC4P56524 AC004923.2-201ENST00000529649 369 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.43□□□□□ -1.54
HDAC4P56524 AC040958.1-201ENST00000561102 201 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HDAC4P56524 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.43□□□□□ -1.54
HDAC4P56524 PRPF19P1-201ENST00000584766 898 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.43□□□□□ -1.54
HDAC4P56524 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.43□□□□□ -1.54
HDAC4P56524 AC034236.3-201ENST00000605999 461 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AC118658.2-201ENST00000618697 459 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AC091932.2-201ENST00000623014 291 ntBASIC5.43□□□□□ -1.54
HDAC4P56524 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms