Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
GABRA4P48169 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.52□□□□□ -1.69
GABRA4P48169 AP003499.2-201ENST00000624100 483 ntBASIC4.52□□□□□ -1.69
GABRA4P48169 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.52□□□□□ -1.69
GABRA4P48169 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.52□□□□□ -1.69
GABRA4P48169 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.52□□□□□ -1.69
GABRA4P48169 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GABRA4P48169 AC100778.3-201ENST00000580060 1750 ntBASIC4.52□□□□□ -1.69
GABRA4P48169 AP001642.1-201ENST00000624727 2117 ntBASIC4.52□□□□□ -1.69
GABRA4P48169 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABRA4P48169 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.52□□□□□ -1.69
GABRA4P48169 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.52□□□□□ -1.69
GABRA4P48169 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABRA4P48169 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABRA4P48169 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.52□□□□□ -1.69
GABRA4P48169 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.51□□□□□ -1.69
GABRA4P48169 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 AC104623.2-202ENST00000623477 4002 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.51□□□□□ -1.69
GABRA4P48169 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
GABRA4P48169 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 AC008549.2-201ENST00000333482 706 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 U3.35-201ENST00000408405 208 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 AL591848.1-201ENST00000413092 322 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 AL807761.1-201ENST00000417622 171 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 TMBIM7P-201ENST00000418074 855 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 AC140479.3-201ENST00000418944 1126 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 RPL7P57-201ENST00000423238 740 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.51□□□□□ -1.69
GABRA4P48169 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.51□□□□□ -1.69
GABRA4P48169 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.51□□□□□ -1.69
GABRA4P48169 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.51□□□□□ -1.69
GABRA4P48169 RPL21P6-201ENST00000479171 504 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 RN7SL205P-201ENST00000490174 284 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 RN7SL346P-201ENST00000491561 294 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.51□□□□□ -1.69
GABRA4P48169 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.51□□□□□ -1.69
GABRA4P48169 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.51□□□□□ -1.69
GABRA4P48169 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.51□□□□□ -1.69
GABRA4P48169 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.51□□□□□ -1.69
GABRA4P48169 RN7SL652P-201ENST00000577769 300 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 RN7SL52P-201ENST00000584271 284 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.51□□□□□ -1.69
GABRA4P48169 RN7SL722P-201ENST00000617780 284 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 RN7SL565P-201ENST00000618246 284 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 AC021106.3-201ENST00000623925 531 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 DHX40P1-201ENST00000588725 1412 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
GABRA4P48169 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.51□□□□□ -1.69
GABRA4P48169 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
GABRA4P48169 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 Z98755.1-201ENST00000407015 1384 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 AL132640.2-201ENST00000559968 1698 ntBASIC4.51□□□□□ -1.69
GABRA4P48169 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GABRA4P48169 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 AL606537.1-201ENST00000607258 2011 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 AL034370.1-201ENST00000397254 1590 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 RPS4XP9-201ENST00000405151 780 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 AC069213.2-201ENST00000420238 366 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.5□□□□□ -1.69
GABRA4P48169 AL157385.1-201ENST00000446973 268 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
GABRA4P48169 GYG1P1-201ENST00000460864 698 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 RN7SL354P-201ENST00000469282 294 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 RN7SL459P-201ENST00000481078 302 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.5□□□□□ -1.69
GABRA4P48169 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.5□□□□□ -1.69
GABRA4P48169 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.5□□□□□ -1.69
GABRA4P48169 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.5□□□□□ -1.69
GABRA4P48169 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.5□□□□□ -1.69
GABRA4P48169 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.5□□□□□ -1.69
GABRA4P48169 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.5□□□□□ -1.69
GABRA4P48169 CYCSP40-201ENST00000575927 294 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 AC068790.4-201ENST00000602474 263 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.5□□□□□ -1.69
GABRA4P48169 AC012414.7-202ENST00000622705 1090 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
GABRA4P48169 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABRA4P48169 AC083843.3-201ENST00000623679 2186 ntBASIC4.5□□□□□ -1.69
GABRA4P48169 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms