Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AP002967.1-201ENST00000624203 539 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AL591379.1-207ENST00000635982 261 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC099654.9-201ENST00000637055 678 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AL596275.2-207ENST00000641188 675 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 ZNF652P1-201ENST00000442420 1309 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 VN2R3P-201ENST00000422626 1412 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 PCAT14-202ENST00000627127 3935 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 RN7SKP74-201ENST00000362849 309 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NKX2-1P43699 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NKX2-1P43699 DBIP1-201ENST00000401435 260 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AL078599.1-201ENST00000402075 293 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC233289.1-201ENST00000403700 508 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC241520.1-201ENST00000422654 1099 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 PTP4A1P7-201ENST00000423476 514 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 NANOGP4-201ENST00000427230 913 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 RPL12P17-201ENST00000432393 498 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC069154.1-201ENST00000432914 542 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 RPS7P2-201ENST00000435134 607 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC092013.1-201ENST00000438795 332 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AMYP1-201ENST00000440059 1023 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 RRM2P4-201ENST00000441721 562 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 RPL7P45-201ENST00000455851 743 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 GTF2IP12-201ENST00000456547 356 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC005229.2-201ENST00000456995 399 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 TPT1P1-201ENST00000458495 518 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX2-1P43699 RNA5SP103-201ENST00000459503 118 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC092754.1-201ENST00000472975 479 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX2-1P43699 RN7SL193P-201ENST00000491708 276 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC010285.3-201ENST00000511668 676 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC011853.1-201ENST00000518911 454 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AL137072.1-201ENST00000603444 466 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 RNU6-1192P-201ENST00000612197 107 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 BNIP3P41-202ENST00000616656 861 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC037198.3-201ENST00000616754 526 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC008147.4-201ENST00000617570 1204 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 RNU6-489P-201ENST00000618289 107 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AC073569.3-201ENST00000619055 682 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 BX005214.3-202ENST00000619809 325 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC073869.10-201ENST00000642016 354 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AL118496.1-201ENST00000440201 1812 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-1P43699 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC009229.4-201ENST00000623854 1947 ntBASIC4.36□□□□□ -1.71
NKX2-1P43699 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX2-1P43699 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-1P43699 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-1P43699 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.35□□□□□ -1.71
NKX2-1P43699 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-1P43699 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
NKX2-1P43699 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms