Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
TNFSF9P41273 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TNFSF9P41273 DHX9P1-201ENST00000436565 3076 ntBASIC5□□□□□ -1.61
TNFSF9P41273 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5□□□□□ -1.61
TNFSF9P41273 RNU1-83P-201ENST00000363426 164 ntBASIC5□□□□□ -1.61
TNFSF9P41273 SNORA71.2-201ENST00000364941 134 ntBASIC5□□□□□ -1.61
TNFSF9P41273 CTSL3P-202ENST00000412179 788 ntBASIC5□□□□□ -1.61
TNFSF9P41273 NMNAT1P2-201ENST00000435192 860 ntBASIC5□□□□□ -1.61
TNFSF9P41273 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5□□□□□ -1.61
TNFSF9P41273 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5□□□□□ -1.61
TNFSF9P41273 AC012123.2-201ENST00000485809 248 ntBASIC5□□□□□ -1.61
TNFSF9P41273 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5□□□□□ -1.61
TNFSF9P41273 TRIM36-IT1-201ENST00000503723 881 ntBASIC5□□□□□ -1.61
TNFSF9P41273 AC098799.3-201ENST00000506095 438 ntBASIC5□□□□□ -1.61
TNFSF9P41273 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5□□□□□ -1.61
TNFSF9P41273 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5□□□□□ -1.61
TNFSF9P41273 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5□□□□□ -1.61
TNFSF9P41273 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5□□□□□ -1.61
TNFSF9P41273 AC125494.2-201ENST00000602431 657 ntBASIC5□□□□□ -1.61
TNFSF9P41273 AL023583.1-201ENST00000607518 1143 ntBASIC5□□□□□ -1.61
TNFSF9P41273 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5□□□□□ -1.61
TNFSF9P41273 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5□□□□□ -1.61
TNFSF9P41273 AC100847.1-201ENST00000611316 481 ntBASIC5□□□□□ -1.61
TNFSF9P41273 AL049536.1-201ENST00000625043 744 ntBASIC5□□□□□ -1.61
TNFSF9P41273 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5□□□□□ -1.61
TNFSF9P41273 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5□□□□□ -1.61
TNFSF9P41273 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5□□□□□ -1.61
TNFSF9P41273 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5□□□□□ -1.61
TNFSF9P41273 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5□□□□□ -1.61
TNFSF9P41273 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFSF9P41273 DDX18P6-201ENST00000450119 1997 ntBASIC5□□□□□ -1.61
TNFSF9P41273 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFSF9P41273 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFSF9P41273 AC108467.2-201ENST00000617640 1597 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TNFSF9P41273 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
TNFSF9P41273 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TNFSF9P41273 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.99□□□□□ -1.61
TNFSF9P41273 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFSF9P41273 AC107068.1-201ENST00000563286 4218 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
TNFSF9P41273 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFSF9P41273 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TNFSF9P41273 RN7SKP186-201ENST00000365371 303 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 U3.23-201ENST00000391132 200 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 FABP12P1-201ENST00000401911 322 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.99□□□□□ -1.61
TNFSF9P41273 UQCRBP1-201ENST00000421129 336 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.99□□□□□ -1.61
TNFSF9P41273 CENPIP1-201ENST00000425713 902 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 C4BPAP2-201ENST00000428434 478 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 RPL23AP93-201ENST00000440847 484 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 AC104651.2-201ENST00000447549 528 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.99□□□□□ -1.61
TNFSF9P41273 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.99□□□□□ -1.61
TNFSF9P41273 ISCUP1-201ENST00000454451 448 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 AC092905.1-201ENST00000467527 949 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 AC093267.1-201ENST00000489176 961 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 AC023424.1-201ENST00000496058 459 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TNFSF9P41273 MIR4697-201ENST00000582977 78 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 AL161912.3-201ENST00000605404 628 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.99□□□□□ -1.61
TNFSF9P41273 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.99□□□□□ -1.61
TNFSF9P41273 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TNFSF9P41273 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TNFSF9P41273 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TNFSF9P41273 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFSF9P41273 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.99□□□□□ -1.61
TNFSF9P41273 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TNFSF9P41273 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFSF9P41273 AL929601.4-201ENST00000613011 1341 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFSF9P41273 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TNFSF9P41273 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFSF9P41273 VN2R3P-201ENST00000422626 1412 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.98□□□□□ -1.61
TNFSF9P41273 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TNFSF9P41273 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TNFSF9P41273 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.98□□□□□ -1.61
TNFSF9P41273 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
TNFSF9P41273 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.98□□□□□ -1.61
TNFSF9P41273 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TNFSF9P41273 RPS3AP23-201ENST00000401762 784 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 Z98745.1-201ENST00000402553 494 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 SNORA81-201ENST00000408493 178 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AC068287.1-201ENST00000430283 295 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AC016712.1-201ENST00000431088 378 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFSF9P41273 MRPL48P1-201ENST00000445390 636 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.98□□□□□ -1.61
TNFSF9P41273 NPM1P28-201ENST00000492269 840 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AK3P4-201ENST00000504283 583 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.98□□□□□ -1.61
TNFSF9P41273 HPRT1P1-201ENST00000509498 657 ntBASIC4.98□□□□□ -1.61
TNFSF9P41273 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms