Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.51□□□□□ -1.69
RFC3P40938 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.51□□□□□ -1.69
RFC3P40938 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.51□□□□□ -1.69
RFC3P40938 AC006349.1-201ENST00000555526 235 ntBASIC4.51□□□□□ -1.69
RFC3P40938 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.51□□□□□ -1.69
RFC3P40938 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RFC3P40938 UBE2FP2-201ENST00000566646 462 ntBASIC4.51□□□□□ -1.69
RFC3P40938 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.51□□□□□ -1.69
RFC3P40938 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.51□□□□□ -1.69
RFC3P40938 AC020910.3-201ENST00000603701 874 ntBASIC4.51□□□□□ -1.69
RFC3P40938 AC087821.1-201ENST00000623639 567 ntBASIC4.51□□□□□ -1.69
RFC3P40938 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.51□□□□□ -1.69
RFC3P40938 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.51□□□□□ -1.69
RFC3P40938 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
RFC3P40938 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
RFC3P40938 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RFC3P40938 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFC3P40938 LINC01355-201ENST00000566551 5444 ntBASIC4.51□□□□□ -1.69
RFC3P40938 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RFC3P40938 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.51□□□□□ -1.69
RFC3P40938 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFC3P40938 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.5□□□□□ -1.69
RFC3P40938 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RFC3P40938 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 OR51C1P-202ENST00000641159 1444 ntBASIC4.5□□□□□ -1.69
RFC3P40938 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
RFC3P40938 RNU6-1263P-201ENST00000384601 106 ntBASIC4.5□□□□□ -1.69
RFC3P40938 HMGB3P7-201ENST00000400214 611 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AL136116.2-201ENST00000404020 785 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AL807761.1-201ENST00000417622 171 ntBASIC4.5□□□□□ -1.69
RFC3P40938 RPL36AP10-201ENST00000421785 322 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.5□□□□□ -1.69
RFC3P40938 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.5□□□□□ -1.69
RFC3P40938 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.5□□□□□ -1.69
RFC3P40938 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 H2AFZP6-201ENST00000444403 394 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AC004980.3-201ENST00000447046 365 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AC073587.1-201ENST00000447093 876 ntBASIC4.5□□□□□ -1.69
RFC3P40938 OR1H1P-201ENST00000448731 937 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AL691482.1-201ENST00000453255 87 ntBASIC4.5□□□□□ -1.69
RFC3P40938 MTND6P32-201ENST00000457611 483 ntBASIC4.5□□□□□ -1.69
RFC3P40938 NIP7P2-201ENST00000485801 544 ntBASIC4.5□□□□□ -1.69
RFC3P40938 OR9N1P-201ENST00000491296 333 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AC005412.2-201ENST00000492004 341 ntBASIC4.5□□□□□ -1.69
RFC3P40938 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.5□□□□□ -1.69
RFC3P40938 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.5□□□□□ -1.69
RFC3P40938 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.5□□□□□ -1.69
RFC3P40938 AP001880.2-201ENST00000538233 448 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 AC018552.1-201ENST00000562099 811 ntBASIC4.5□□□□□ -1.69
RFC3P40938 MIR4737-201ENST00000583979 81 ntBASIC4.5□□□□□ -1.69
RFC3P40938 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 SNORA35B-201ENST00000607417 129 ntBASIC4.5□□□□□ -1.69
RFC3P40938 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 AC108359.1-201ENST00000616451 1211 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.5□□□□□ -1.69
RFC3P40938 AC006840.1-201ENST00000623069 542 ntBASIC4.5□□□□□ -1.69
RFC3P40938 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.5□□□□□ -1.69
RFC3P40938 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFC3P40938 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
RFC3P40938 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.49□□□□□ -1.69
RFC3P40938 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.49□□□□□ -1.69
RFC3P40938 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 RNA5SP505-201ENST00000364748 108 ntBASIC4.49□□□□□ -1.69
RFC3P40938 OR13C3-201ENST00000374781 1108 ntBASIC4.49□□□□□ -1.69
RFC3P40938 ATP5HP3-201ENST00000396994 486 ntBASIC4.49□□□□□ -1.69
RFC3P40938 AC013442.1-201ENST00000397347 228 ntBASIC4.49□□□□□ -1.69
RFC3P40938 RPS24P12-201ENST00000402084 394 ntBASIC4.49□□□□□ -1.69
RFC3P40938 U3.32-201ENST00000408116 212 ntBASIC4.49□□□□□ -1.69
RFC3P40938 GTF2IP5-201ENST00000414608 731 ntBASIC4.49□□□□□ -1.69
RFC3P40938 RAB9AP4-201ENST00000415230 609 ntBASIC4.49□□□□□ -1.69
RFC3P40938 TBCAP2-201ENST00000416175 326 ntBASIC4.49□□□□□ -1.69
RFC3P40938 COX6CP13-201ENST00000428703 226 ntBASIC4.49□□□□□ -1.69
RFC3P40938 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms