Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RPA3P35244 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 AC104118.1-201ENST00000607625 1589 ntBASIC4.7□□□□□ -1.66
RPA3P35244 SAMMSON-226ENST00000642089 1582 ntBASIC4.7□□□□□ -1.66
RPA3P35244 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RPA3P35244 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.7□□□□□ -1.66
RPA3P35244 PDSS1P1-201ENST00000422953 1114 ntBASIC4.7□□□□□ -1.66
RPA3P35244 FTLP19-201ENST00000433300 394 ntBASIC4.7□□□□□ -1.66
RPA3P35244 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.7□□□□□ -1.66
RPA3P35244 HIGD1AP8-201ENST00000453927 274 ntBASIC4.7□□□□□ -1.66
RPA3P35244 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.7□□□□□ -1.66
RPA3P35244 EIF2S2P5-201ENST00000457635 968 ntBASIC4.7□□□□□ -1.66
RPA3P35244 RPL7P16-201ENST00000479738 738 ntBASIC4.7□□□□□ -1.66
RPA3P35244 RPL5P22-201ENST00000480199 884 ntBASIC4.7□□□□□ -1.66
RPA3P35244 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.7□□□□□ -1.66
RPA3P35244 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.7□□□□□ -1.66
RPA3P35244 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.7□□□□□ -1.66
RPA3P35244 GCSHP4-201ENST00000538792 439 ntBASIC4.7□□□□□ -1.66
RPA3P35244 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.7□□□□□ -1.66
RPA3P35244 PCNPP1-201ENST00000552501 511 ntBASIC4.7□□□□□ -1.66
RPA3P35244 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.7□□□□□ -1.66
RPA3P35244 OR1F2P-201ENST00000570470 933 ntBASIC4.7□□□□□ -1.66
RPA3P35244 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 MIR3934-201ENST00000579806 107 ntBASIC4.7□□□□□ -1.66
RPA3P35244 AC005084.1-201ENST00000605160 304 ntBASIC4.7□□□□□ -1.66
RPA3P35244 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 CR381572.2-201ENST00000624852 397 ntBASIC4.7□□□□□ -1.66
RPA3P35244 AC055839.1-201ENST00000634467 498 ntBASIC4.7□□□□□ -1.66
RPA3P35244 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RPA3P35244 RBPJP2-201ENST00000618187 1444 ntBASIC4.7□□□□□ -1.66
RPA3P35244 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.7□□□□□ -1.66
RPA3P35244 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RPA3P35244 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPA3P35244 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
RPA3P35244 AC015813.6-201ENST00000624409 5808 ntBASIC4.7□□□□□ -1.66
RPA3P35244 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.69□□□□□ -1.66
RPA3P35244 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.69□□□□□ -1.66
RPA3P35244 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 AL590762.2-201ENST00000395798 571 ntBASIC4.69□□□□□ -1.66
RPA3P35244 GAPDHP15-201ENST00000398586 975 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AL109941.1-201ENST00000401925 229 ntBASIC4.69□□□□□ -1.66
RPA3P35244 RN7SKP167-201ENST00000411047 285 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AC114755.2-201ENST00000413520 361 ntBASIC4.69□□□□□ -1.66
RPA3P35244 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.69□□□□□ -1.66
RPA3P35244 AC007394.1-201ENST00000421941 531 ntBASIC4.69□□□□□ -1.66
RPA3P35244 RPL21P43-201ENST00000425440 472 ntBASIC4.69□□□□□ -1.66
RPA3P35244 NPM1P48-201ENST00000436002 853 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AC073648.4-201ENST00000442655 781 ntBASIC4.69□□□□□ -1.66
RPA3P35244 OR52J1P-201ENST00000450596 932 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AL645937.3-201ENST00000453647 936 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AC104849.1-201ENST00000462623 405 ntBASIC4.69□□□□□ -1.66
RPA3P35244 RPL23AP65-201ENST00000475608 468 ntBASIC4.69□□□□□ -1.66
RPA3P35244 RN7SL826P-201ENST00000479724 288 ntBASIC4.69□□□□□ -1.66
RPA3P35244 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.69□□□□□ -1.66
RPA3P35244 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.69□□□□□ -1.66
RPA3P35244 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 KCTD9P6-201ENST00000522306 950 ntBASIC4.69□□□□□ -1.66
RPA3P35244 MORF4L1P3-201ENST00000525966 950 ntBASIC4.69□□□□□ -1.66
RPA3P35244 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.69□□□□□ -1.66
RPA3P35244 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.69□□□□□ -1.66
RPA3P35244 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.69□□□□□ -1.66
RPA3P35244 MIR4436B2-201ENST00000581415 91 ntBASIC4.69□□□□□ -1.66
RPA3P35244 MIR4436B1-201ENST00000583272 91 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.69□□□□□ -1.66
RPA3P35244 AP002884.5-201ENST00000595053 1132 ntBASIC4.69□□□□□ -1.66
RPA3P35244 RPL7P50-201ENST00000600588 727 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AC087283.1-201ENST00000604029 1074 ntBASIC4.69□□□□□ -1.66
RPA3P35244 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.69□□□□□ -1.66
RPA3P35244 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
RPA3P35244 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.69□□□□□ -1.66
RPA3P35244 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 MAPK10-320ENST00000641462 6696 ntBASIC4.69□□□□□ -1.66
RPA3P35244 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.69□□□□□ -1.66
RPA3P35244 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPA3P35244 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPA3P35244 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPA3P35244 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.68□□□□□ -1.66
RPA3P35244 AL136164.3-201ENST00000624429 3978 ntBASIC4.68□□□□□ -1.66
RPA3P35244 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RPA3P35244 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPA3P35244 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPA3P35244 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPA3P35244 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.68□□□□□ -1.66
RPA3P35244 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.68□□□□□ -1.66
RPA3P35244 AC020633.1-201ENST00000468439 2247 ntBASIC4.68□□□□□ -1.66
RPA3P35244 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPA3P35244 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RPA3P35244 RN7SKP149-201ENST00000363008 344 ntBASIC4.68□□□□□ -1.66
RPA3P35244 RNA5SP151-201ENST00000365632 117 ntBASIC4.68□□□□□ -1.66
RPA3P35244 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms