Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SNORD65-201ENST00000391079 73 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 MIR937-201ENST00000401271 86 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AL133270.1-201ENST00000402635 279 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AL592291.1-201ENST00000403830 352 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AL136131.1-201ENST00000406079 803 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA3P32297 RPS26P13-201ENST00000419030 330 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA3P32297 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 RPL34P20-201ENST00000442771 351 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC108751.2-201ENST00000469993 231 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AC037198.2-201ENST00000478845 733 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 RPL37AP8-201ENST00000494116 276 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 COX6B1P5-201ENST00000509843 249 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA3P32297 OR5AZ1P-201ENST00000527448 943 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA3P32297 OR8X1P-201ENST00000534542 869 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AC084759.1-201ENST00000561168 290 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 MIR4436B2-201ENST00000581415 91 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 MIR4436B1-201ENST00000583272 91 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC020915.5-201ENST00000596836 964 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC053481.2-202ENST00000582394 1500 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 INTS6P1-201ENST00000504674 2530 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
CHRNA3P32297 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.15□□□□□ -1.58
CHRNA3P32297 AC073429.2-201ENST00000569694 1444 ntBASIC5.15□□□□□ -1.58
CHRNA3P32297 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA3P32297 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
CHRNA3P32297 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA3P32297 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNA3P32297 RN7SKP104-201ENST00000362605 328 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CHRNA3P32297 SNORA66-201ENST00000384792 133 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA3P32297 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AC007064.3-201ENST00000422608 359 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 NPM1P26-201ENST00000426339 738 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 HSPE1P16-201ENST00000426640 348 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA3P32297 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA3P32297 TPTE2P1-204ENST00000435256 593 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 RHOT1P3-201ENST00000436571 331 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AP000936.3-201ENST00000438127 255 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 PA2G4P6-201ENST00000438325 1197 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AL354714.3-201ENST00000447284 493 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 TRY2P-201ENST00000448860 689 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 RN7SL346P-201ENST00000491561 294 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.15□□□□□ -1.59
CHRNA3P32297 Y_RNA.719-201ENST00000517156 106 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AP001922.4-201ENST00000526967 290 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA3P32297 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNA3P32297 SNORD91B-202ENST00000608459 222 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AL133370.2-201ENST00000619934 439 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 AC021106.3-201ENST00000623925 531 ntBASIC5.15□□□□□ -1.59
CHRNA3P32297 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA3P32297 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA3P32297 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA3P32297 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA3P32297 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNA3P32297 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNA3P32297 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA3P32297 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA3P32297 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.14□□□□□ -1.59
CHRNA3P32297 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA3P32297 PCAT14-202ENST00000627127 3935 ntBASIC5.14□□□□□ -1.59
CHRNA3P32297 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.14□□□□□ -1.59
CHRNA3P32297 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms