Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC073069.1-201ENST00000428657 441 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AL365184.2-201ENST00000431139 435 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AL139415.2-201ENST00000431968 163 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC12P31275 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC12P31275 AC092106.2-201ENST00000436597 487 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC091862.1-201ENST00000438016 1100 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 MTND2P20-201ENST00000440805 661 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC12P31275 RPL23AP28-201ENST00000448062 470 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC108463.1-201ENST00000450258 347 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC12P31275 AKR1D1P1-201ENST00000457236 936 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 RPL23AP12-201ENST00000467573 473 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 RPL19P11-201ENST00000495944 589 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 SNX5P1-201ENST00000505757 1041 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC12P31275 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC12P31275 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC12P31275 HIGD1AP6-201ENST00000521833 279 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC12P31275 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.9□□□□□ -1.46
HOXC12P31275 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC12P31275 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC12P31275 AL591767.3-201ENST00000554632 525 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 ZNF519P3-201ENST00000557158 1032 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 CTSLP2-201ENST00000580501 394 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC007448.1-201ENST00000582714 234 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 MIR548AB-201ENST00000584917 84 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.9□□□□□ -1.46
HOXC12P31275 AL035410.2-201ENST00000604963 864 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AP001596.2-201ENST00000608410 312 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AL357080.1-201ENST00000617394 239 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HOXC12P31275 AC131009.3-201ENST00000621809 287 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC006328.2-201ENST00000623198 397 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AC012005.2-201ENST00000624333 397 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC12P31275 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC12P31275 AC010132.4-201ENST00000569883 1368 ntBASIC5.9□□□□□ -1.47
HOXC12P31275 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC12P31275 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HOXC12P31275 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC12P31275 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC12P31275 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HOXC12P31275 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HOXC12P31275 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.9□□□□□ -1.47
HOXC12P31275 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC12P31275 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC12P31275 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC12P31275 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.89□□□□□ -1.47
HOXC12P31275 TATDN2P3-201ENST00000452855 3665 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC12P31275 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC12P31275 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC12P31275 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC12P31275 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HOXC12P31275 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC12P31275 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
HOXC12P31275 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC12P31275 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC12P31275 RNA5SP321-201ENST00000362722 111 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 RN7SKP237-201ENST00000364663 301 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC12P31275 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC12P31275 RNU6-225P-201ENST00000384613 103 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC12P31275 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC12P31275 AC245452.2-201ENST00000435222 392 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 UBE2FP3-201ENST00000436366 524 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC12P31275 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 RBMY3AP-201ENST00000449381 1145 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC12P31275 BZW1P1-201ENST00000454901 1240 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC12P31275 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC12P31275 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC12P31275 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC12P31275 AC091874.2-201ENST00000505889 720 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC12P31275 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.89□□□□□ -1.47
HOXC12P31275 NPM1P6-201ENST00000521088 871 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC12P31275 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 AGGF1P8-201ENST00000562979 1000 ntBASIC5.89□□□□□ -1.47
HOXC12P31275 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.89□□□□□ -1.47
HOXC12P31275 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC12P31275 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC12P31275 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms