Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RPL21P133-201ENST00000443666 476 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AC010733.1-201ENST00000451515 401 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AL513343.1-201ENST00000451818 792 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AL691482.1-201ENST00000453255 87 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 TPRKBP1-201ENST00000456243 481 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 FABP5P6-201ENST00000510588 409 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AC034205.1-201ENST00000520621 638 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 BUD31P1-201ENST00000521828 359 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AC018442.3-201ENST00000523025 183 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC8P31273 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC010487.1-201ENST00000594408 1172 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 MIMT1-201ENST00000597105 1050 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AC005021.1-201ENST00000608730 355 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 MIR6853-201ENST00000619642 74 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC133552.1-201ENST00000569988 4007 ntBASIC5.42□□□□□ -1.54
HOXC8P31273 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC8P31273 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC8P31273 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXC8P31273 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC8P31273 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC8P31273 AC110792.3-201ENST00000595906 1614 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HOXC8P31273 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXC8P31273 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC8P31273 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC8P31273 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC8P31273 AC007618.1-201ENST00000366455 732 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC8P31273 MIR298-201ENST00000401212 88 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AL357515.1-201ENST00000402967 542 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AL049697.2-201ENST00000403708 294 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC002524.1-201ENST00000411687 547 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC8P31273 TBCAP2-201ENST00000416175 326 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC8P31273 OR2B7P-201ENST00000429302 934 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC007563.3-201ENST00000433233 371 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC091390.1-201ENST00000433904 331 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC8P31273 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC8P31273 AC234781.3-201ENST00000452540 973 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC108751.3-201ENST00000461814 1020 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC090602.1-201ENST00000469695 252 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 RPL12P20-201ENST00000475538 479 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC8P31273 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC8P31273 OR5M2P-201ENST00000529003 936 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC8P31273 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC8P31273 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC8P31273 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC8P31273 RPL21P136-201ENST00000605378 396 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC092953.2-201ENST00000608000 699 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC083809.1-201ENST00000615051 472 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AL049794.2-201ENST00000616301 365 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AC021106.3-201ENST00000623925 531 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXC8P31273 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HOXC8P31273 SMG1P6-201ENST00000532337 2930 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC8P31273 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC8P31273 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC8P31273 AC022417.1-201ENST00000624768 1303 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 AL022311.1-201ENST00000623726 19416 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC8P31273 ABCC13-202ENST00000463099 3842 ntBASIC5.41□□□□□ -1.54
HOXC8P31273 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC8P31273 TTC39DP-201ENST00000416781 1688 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC8P31273 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC8P31273 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
HOXC8P31273 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC8P31273 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC8P31273 OR4K15-201ENST00000305051 1216 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 PEX12P1-201ENST00000400284 1048 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 RPL12P9-201ENST00000412942 488 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC8P31273 AC069213.2-201ENST00000420238 366 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 OR6K4P-201ENST00000423179 955 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 AL590623.1-201ENST00000427864 105 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 DNAJC19P7-201ENST00000428811 344 ntBASIC5.4□□□□□ -1.54
HOXC8P31273 AC068287.1-201ENST00000430283 295 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms