Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.8□□□□□ -1.64
CLPTM1O96005 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CLPTM1O96005 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.8□□□□□ -1.64
CLPTM1O96005 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC019155.1-201ENST00000382242 574 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AC092642.1-201ENST00000392417 425 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 ST13P16-201ENST00000401760 781 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 RN7SKP293-201ENST00000411389 296 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.8□□□□□ -1.64
CLPTM1O96005 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 ELOCP6-201ENST00000429066 328 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC012075.1-201ENST00000436549 580 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AL390119.1-201ENST00000440329 312 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 XKRY2-201ENST00000442362 1093 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 RPL7AP61-201ENST00000443410 636 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 VDAC2P4-201ENST00000452925 711 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AC005008.1-201ENST00000456151 612 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 MTND6P32-201ENST00000457611 483 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 ELOCP12-201ENST00000458706 328 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AC092905.1-201ENST00000467527 949 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.8□□□□□ -1.64
CLPTM1O96005 RPL23AP37-201ENST00000479658 549 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 RN7SL466P-201ENST00000497546 295 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC016550.1-201ENST00000505348 785 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.8□□□□□ -1.64
CLPTM1O96005 RNA5SP362-201ENST00000516048 118 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 RNA5SP360-201ENST00000516555 118 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLPTM1O96005 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC126365.2-201ENST00000580630 379 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 MIR1273E-201ENST00000581165 102 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AL589674.2-201ENST00000604304 337 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 IMMP1LP1-201ENST00000605170 488 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AL355816.2-201ENST00000610049 647 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AL049767.1-202ENST00000637826 242 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.8□□□□□ -1.64
CLPTM1O96005 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLPTM1O96005 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLPTM1O96005 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.79□□□□□ -1.64
CLPTM1O96005 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.79□□□□□ -1.64
CLPTM1O96005 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 RN7SKP104-201ENST00000362605 328 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 AL592291.1-201ENST00000403830 352 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 GAPDHP42-201ENST00000406848 981 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AC009237.10-201ENST00000414112 510 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AC004690.1-201ENST00000418216 328 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 FABP7P1-201ENST00000424004 391 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 GTF2IP2-201ENST00000424290 697 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 MTND2P21-201ENST00000436242 1042 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.79□□□□□ -1.64
CLPTM1O96005 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 Z99127.2-201ENST00000441426 334 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AC019185.1-201ENST00000442718 389 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 AL645937.3-201ENST00000453647 936 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AL133244.1-201ENST00000456007 258 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLPTM1O96005 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.79□□□□□ -1.64
CLPTM1O96005 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 AC010468.3-201ENST00000508225 458 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 STMN1P2-201ENST00000508435 439 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.79□□□□□ -1.64
CLPTM1O96005 RNU6-319P-201ENST00000516025 108 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 RNU6-1102P-201ENST00000516149 96 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 AC067904.2-201ENST00000517322 1283 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 NPM1P6-201ENST00000521088 871 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 MTND1P6-201ENST00000523621 946 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.79□□□□□ -1.64
CLPTM1O96005 PDCD5P1-201ENST00000543528 309 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.79□□□□□ -1.64
CLPTM1O96005 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLPTM1O96005 AL049830.4-201ENST00000555149 351 ntBASIC4.79□□□□□ -1.64
CLPTM1O96005 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms