Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.03□□□□□ -1.76
UPK1BO75841 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1BO75841 AL512430.4-201ENST00000603085 613 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AL078624.2-201ENST00000605063 554 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 MIR432-201ENST00000606207 94 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AC012603.1-201ENST00000606424 528 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC023813.4-201ENST00000607580 580 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 U91328.4-201ENST00000608919 517 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 NF1P10-201ENST00000613227 742 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC021106.3-201ENST00000623925 531 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 CYP4F35P-202ENST00000636121 390 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.03□□□□□ -1.76
UPK1BO75841 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 SAMMSON-209ENST00000641222 1100 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 ZNF962P-201ENST00000443465 3140 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1BO75841 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1BO75841 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 MIR27A-201ENST00000385073 78 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 AL596448.1-201ENST00000415024 392 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 GJA6P-201ENST00000415117 1042 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.02□□□□□ -1.77
UPK1BO75841 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1BO75841 AC022022.1-201ENST00000430304 178 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 RPSAP32-201ENST00000432681 526 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 CFL1P1-202ENST00000432948 411 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1BO75841 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.02□□□□□ -1.77
UPK1BO75841 TIMM8BP2-201ENST00000445940 251 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 MTND2P25-201ENST00000449028 610 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 ACA64.1-201ENST00000459171 127 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1BO75841 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
UPK1BO75841 MIR2114-201ENST00000516645 80 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1BO75841 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.02□□□□□ -1.77
UPK1BO75841 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1BO75841 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1BO75841 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.02□□□□□ -1.77
UPK1BO75841 AC092121.1-201ENST00000569452 202 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 AP000919.1-201ENST00000582850 985 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1BO75841 AL121932.1-201ENST00000605542 214 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 AC012511.1-201ENST00000608140 449 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 AL592494.3-201ENST00000609485 464 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1BO75841 MIR6721-201ENST00000617181 87 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1BO75841 AP003499.2-201ENST00000624100 483 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1BO75841 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
UPK1BO75841 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1BO75841 AC027228.2-201ENST00000567141 2154 ntBASIC4.02□□□□□ -1.77
UPK1BO75841 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
UPK1BO75841 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1BO75841 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK1BO75841 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1BO75841 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK1BO75841 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK1BO75841 AC104966.1-201ENST00000467010 1464 ntBASIC4.01□□□□□ -1.77
UPK1BO75841 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
UPK1BO75841 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
UPK1BO75841 AL590762.2-201ENST00000395798 571 ntBASIC4.01□□□□□ -1.77
UPK1BO75841 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK1BO75841 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK1BO75841 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.01□□□□□ -1.77
UPK1BO75841 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK1BO75841 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.01□□□□□ -1.77
UPK1BO75841 CDY14P-201ENST00000431260 1014 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms