Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC060780.2-201ENST00000589047 198 ntBASIC2□□□□□ -2.09
USH2AO75445 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC2□□□□□ -2.09
USH2AO75445 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC2□□□□□ -2.09
USH2AO75445 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC2□□□□□ -2.09
USH2AO75445 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 IARS-201ENST00000375627 697 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 RPL11P3-201ENST00000395256 523 ntBASIC2□□□□□ -2.09
USH2AO75445 AL079342.1-201ENST00000401460 267 ntBASIC2□□□□□ -2.09
USH2AO75445 DNAJA1P6-201ENST00000437347 354 ntBASIC2□□□□□ -2.09
USH2AO75445 Y_RNA.638-201ENST00000459374 113 ntBASIC2□□□□□ -2.09
USH2AO75445 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2□□□□□ -2.09
USH2AO75445 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC2□□□□□ -2.09
USH2AO75445 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 MIR6500-201ENST00000622700 86 ntBASIC2□□□□□ -2.09
USH2AO75445 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 AC083843.3-201ENST00000623679 2186 ntBASIC2□□□□□ -2.09
USH2AO75445 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
USH2AO75445 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
USH2AO75445 SOCS5P3-201ENST00000425115 1576 ntBASIC2□□□□□ -2.09
USH2AO75445 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC2□□□□□ -2.09
USH2AO75445 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
USH2AO75445 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2□□□□□ -2.09
USH2AO75445 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 IGKV2D-19-201ENST00000523346 262 ntBASIC2□□□□□ -2.09
USH2AO75445 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 AL021877.2-201ENST00000624442 10684 ntBASIC2□□□□□ -2.09
USH2AO75445 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC2□□□□□ -2.09
USH2AO75445 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 AC007382.1-201ENST00000624376 2618 ntBASIC1.99□□□□□ -2.09
USH2AO75445 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 OR56A5-201ENST00000340110 738 ntBASIC1.99□□□□□ -2.09
USH2AO75445 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 CTSL3P-202ENST00000412179 788 ntBASIC1.99□□□□□ -2.09
USH2AO75445 LINC00993-201ENST00000420453 540 ntBASIC1.99□□□□□ -2.09
USH2AO75445 PRDX3P3-201ENST00000447765 522 ntBASIC1.99□□□□□ -2.09
USH2AO75445 Y_RNA.676-201ENST00000516393 96 ntBASIC1.99□□□□□ -2.09
USH2AO75445 DUXAP2-201ENST00000519198 589 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC1.99□□□□□ -2.09
USH2AO75445 FKBP1BP1-201ENST00000553366 325 ntBASIC1.99□□□□□ -2.09
USH2AO75445 GTF2IP8-201ENST00000560687 584 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC1.99□□□□□ -2.09
USH2AO75445 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC1.99□□□□□ -2.09
USH2AO75445 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 MTCO1P12-201ENST00000414273 1543 ntBASIC1.99□□□□□ -2.09
USH2AO75445 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 ATP5F1P4-201ENST00000397288 746 ntBASIC1.99□□□□□ -2.09
USH2AO75445 TBCAP2-201ENST00000416175 326 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 MTCO1P45-201ENST00000431457 267 ntBASIC1.99□□□□□ -2.09
USH2AO75445 TEX41-206ENST00000432608 661 ntTSL 3 BASIC1.99□□□□□ -2.09
USH2AO75445 RPL23AP43-201ENST00000446445 471 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AC104306.1-201ENST00000449702 371 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USH2AO75445 ISCUP1-201ENST00000454451 448 ntBASIC1.99□□□□□ -2.09
USH2AO75445 KCNMB3P1-202ENST00000493696 3389 ntBASIC1.99□□□□□ -2.09
USH2AO75445 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC1.99□□□□□ -2.09
USH2AO75445 MTND4LP31-201ENST00000514859 294 ntBASIC1.99□□□□□ -2.09
USH2AO75445 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC1.99□□□□□ -2.09
USH2AO75445 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 AL121576.1-201ENST00000556055 276 ntBASIC1.99□□□□□ -2.09
USH2AO75445 MEG8-217ENST00000556637 924 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC1.99□□□□□ -2.09
USH2AO75445 AC069061.3-201ENST00000582254 823 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms